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Solanum lycopersicum mRNA Solyc01g067710.2.1

mRNA details  
Name
Solyc01g067710.2.1
Type
mRNA
Length
2,241
Organism
Solanum lycopersicum
Description
Sodium/hydrogen exchanger (AHRD V1 **** Q1JRA3_SOLLC); contains Interpro domain(s) IPR018407 Na+/H+ exchanger, isoforms 1-4, conserved region
Location(s)
SL2.50ch01:76651578..76656445
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016021
Length
4868
Nb exon
15
Sifter term
GO:0015385
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g067710.2.1 Sodium/hydrogen exchanger (AHRD V1 **** Q1JRA3_SOLLC); contains Interpro domain(s) IPR018407 Na+/H+ exchanger, isoforms 1-4, conserved region

AATCAATCATTTCTCTAGAACTTTCCTTTCACTTTGATTCTCAATTTTTAATTTTCAATTATTTCTTACTGAATTCTGCTTTTGTTCAAGTTTTGATGATTTGTGTTCAGTTTCGAGTAGTTTGAGTTATTTTGCTAAAAATCTTGAGATCTGATTGAATTTCCGGTGTTGTAAACTCAATTTGACGGGCAATTTTGATCGGAATATTGGAGTTTGTTTGAATTGGAAATAAGGTTTCCAAAGAGGAAACTTGTTCGAAAATATGGTGTTTGACTTTGGGACGCTGGTGGCAAGTTTGAACAGATTATCAACTTCTGATCATCAATCTGTTGTGTCGATTAACTTGTTTGTTGCATTAATCTGCGCGTGTATTATTATCGGTCATCTACTCGAGGAAAATAGATGGATGAATGAGTCCATTACTGCCCTTGTTATCGGTCTTTGCACTGGAGTTGTCATTCTACTAATAAGTGGAGGAAAGAACTCACATATTTTAGTCTTCAGCGAAGATCTTTTCTTCATTTACCTTCTTCCGCCTATCATTTTTAATGCTGGGTTTCAGGTGAAAAAGAAATCATTTTTCCGCAATTTCAGCACTATCATGCTTTTTGGGGCAGTTGGCACCTTGATATCATTCATTATCATATCATTCGGTGCTACTAGCATTTTCAAGAAATGGAATATTGGGCACCTTGAAATTGGAGATTACCTTGCTATTGGAGCAATCTTCTCTGCAACAGATTCTGTTTGCACCTTACAAGTGCTTAGTCAGGATGAAACACCCTTACTATACAGTCTAGTTTTTGGGGAAGGTGTTGTGAATGATGCCACATCTGTAGTTCTGTTCAATGCTGTCCAGAACTTTGACTTATCTCATATCAACACAAGCAAAGCTCTGGAATTAGTTGGAAATTTTCTGTACTTGTTTGCGTCGAGCACCATCTTAGGGGTTGTTGCTGGTCTACTGAGCGCCTATATAATTAAAAAACTCTACTTTGGAAGGCACTCTACTGACCGTGAGGTTGCTATAGTGATACTTATGGCTTACCTATCTTACATGCTTGCTGAATTATTCTATTTAAGTGCAATCCTCACTGTGTTTTTCTCTGGGATCGTGATGTCTCACTACACCTGGCATAATGTGACTGAGAGCTCAAGAGTCACCACCAAGCACGCTTTTGCTACATTATCATTTATTGCTGAAATATTCATATTCCTTTATGTTGGTATGGATGCTTTGGACATTGAGAAGTGGAGATTTGTAAGCGACAGCCCACAATTATCAGTTCAAGTTAGCTCCATACTGTTGGGTCTTGTTTTGGTTGGAAGGGCAGCATTTGTCTTCCCCCTGTCATTTTTGTCCAACTTGATGAAGAAGTCTCCGGAGGAGAGGATTAGCTTTAACCAGCAAATCATAATATGGTGGGCTGGACTTATGCGAGGTGCTGTTTCAGTGGCTCTTGCTTATAATCAGTTTACCAGGGGAGGCCATACTCAGTTACGTGCCAATGCCATAATGATCACAAGTACTATCACTGTTGTCCTTTTCAGCACAGGGGTATTCGGGTTGATGACAAAACCTTTAATCAGATTATTGCAACCCTCACCAAAACACTTGACCAGAATGATCTCTTCTGAACCGACGACCCCAAAATCCTTCATCGTGCCACTTCTTGAAAGTACACAAGACTCAGAAGCTGATCTGGGCCCAAATGTACCCCGTCCCCACAGTTTGCGTATGCTCCTATCAACACCATCTCACACTGTGCATCGTTACTGGAGAAAATTTGACAACGCATTCATGCGTCCCGTTTTCGGTGGACGAGGTTTTGTTCCTTTTGTTCCAGGATCACCAACGGAACCAAGTGGTCATTAATTGCATTGCTGGATATGCAGATTACAGAAAATCATTTGTGTCTTGGGAGAGGGGGGAGGGAAGATGGCAGTTTTTCGTTTTGAGGTTTTGTTTACTGTTAATAGCTTTTGGGTGTTGCTATGTGGTTAAAAAGGGGGTTTTCTGGTTTATAGGTATAATCATTTTTCAGCTGAGTGCTGGCTTTTGGTCATTGCTGACAATTTCTGTCTGAATTCCTTGATTTTCTTTTTTGGTTAGTAATTGATCAGAACACCAAATAGGTGTATATTCTGTTAAGGCATATGGGCTTAGCTGCATAAATTATCTTTGTAAAATCCATCTACAGGTTAGAGTTTGGTTCATTTATATGTAGAATTCACCTGGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g067710.2.1SL2.50ch01:76652084..76656080538+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g067710.2SL2.50ch01:76651578..766564454,868+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g067710.2.1.1SL2.50ch01:76651578..76651786209+n/a
exonexon:Solyc01g067710.2.1.10SL2.50ch01:76654533..76654633101+1
exonexon:Solyc01g067710.2.1.11SL2.50ch01:76654743..76654844102+n/a
exonexon:Solyc01g067710.2.1.12SL2.50ch01:76654949..76655087139+1
exonexon:Solyc01g067710.2.1.13SL2.50ch01:76655171..7665523363+1
exonexon:Solyc01g067710.2.1.14SL2.50ch01:76655350..7665543384+n/a
exonexon:Solyc01g067710.2.1.15SL2.50ch01:76655763..76656445683+n/a
exonexon:Solyc01g067710.2.1.2SL2.50ch01:76652032..76652258227+n/a
exonexon:Solyc01g067710.2.1.3SL2.50ch01:76652374..76652492119+n/a
exonexon:Solyc01g067710.2.1.4SL2.50ch01:76653191..7665328898+n/a
exonexon:Solyc01g067710.2.1.5SL2.50ch01:76653397..7665345660+1
exonexon:Solyc01g067710.2.1.6SL2.50ch01:76653550..7665359647+2
exonexon:Solyc01g067710.2.1.7SL2.50ch01:76653711..76653905195+2
exonexon:Solyc01g067710.2.1.8SL2.50ch01:76654022..7665406847+n/a
exonexon:Solyc01g067710.2.1.9SL2.50ch01:76654335..7665440167+n/a
intronintron:Solyc01g067710.2.1.1SL2.50ch01:76651787..76652031n/a+n/a
intronintron:Solyc01g067710.2.1.10SL2.50ch01:76654634..76654742n/a+n/a
intronintron:Solyc01g067710.2.1.11SL2.50ch01:76654845..76654948n/a+n/a
intronintron:Solyc01g067710.2.1.12SL2.50ch01:76655088..76655170n/a+n/a
intronintron:Solyc01g067710.2.1.13SL2.50ch01:76655234..76655349n/a+n/a
intronintron:Solyc01g067710.2.1.14SL2.50ch01:76655434..76655762n/a+n/a
intronintron:Solyc01g067710.2.1.2SL2.50ch01:76652259..76652373n/a+n/a
intronintron:Solyc01g067710.2.1.3SL2.50ch01:76652493..76653190n/a+n/a
intronintron:Solyc01g067710.2.1.4SL2.50ch01:76653289..76653396n/a+n/a
intronintron:Solyc01g067710.2.1.5SL2.50ch01:76653457..76653549n/a+n/a
intronintron:Solyc01g067710.2.1.6SL2.50ch01:76653597..76653710n/a+n/a
intronintron:Solyc01g067710.2.1.7SL2.50ch01:76653906..76654021n/a+n/a
intronintron:Solyc01g067710.2.1.8SL2.50ch01:76654069..76654334n/a+n/a
intronintron:Solyc01g067710.2.1.9SL2.50ch01:76654402..76654532n/a+n/a
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Related viewsNone found
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