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Solanum lycopersicum mRNA Solyc01g067390.2.1

mRNA details  
Name
Solyc01g067390.2.1
Type
mRNA
Length
3,561
Organism
Solanum lycopersicum
Description
Chromodomain-helicase-DNA-binding protein 2 (AHRD V1 *--* CHD2_HUMAN); contains Interpro domain(s) IPR000330 SNF2-related
Location(s)
SL2.50ch01:75866911..75877833
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0003677
  • GO:0005524
  • GO:0016585
Length
10923
Nb exon
25
Sifter term
  • GO:0015616
  • GO:0042393
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g067390.2.1 Chromodomain-helicase-DNA-binding protein 2 (AHRD V1 *--* CHD2_HUMAN); contains Interpro domain(s) IPR000330 SNF2-related

GGTCCATATTACAGTACCACTACTTCACCAGAGAAACCCTCAAATTTACGTTTTTCCCCCCCTTCTGAATCATAGCGATGGCGAGAAACACGAGAGCGAAATCCTCGTCGTCGGAGCCATTATCGGACGGTTCAGAGGAGGAGCAAGTCAACGATCTAGTCAACGATGAGGAAGATGAGGAGGAGCTTGAAGCTGTCGCTAGGTCAGCAGATGATGACGGCGATGACGAAGCTGTTGCTGATAGAGAAGACGGTGATGATGATGAAGATGAGGAGGAAGACATTGCAGCTAATGAAATCTCCAAGCGTGAAAAGGCACGGTTAAAAGATATGCAGAGGCGTAAGAAGCAAAAGATACAGGAAATGTTGGATGCGCAGAATGCTGCAATAGAAGCTGACATGAGTAACAAGGGGAAGGGGCGTCTTAAGTATCTTTTGGAGCAGACAGAGTTATTTGCACATTTTGCAAAAGGCGATCAATCGACTTCAGAAAAGAAGACAAAAGGAAGGGGCCGTCATGCGTCAAAGATAACCGAAGAGGAAGAAGATGAGGAGTATCTCAAAGAAGAAGATGGTGGGCTGTCCGGGAATACACGGCTATTGGCACAACCTTCTTGTATTCAGGGAAAGATGAGGGATTATCAACTTGCTGGTTTGAACTGGATGATACGGCTATATGAGAACGGCATAAATGGGATACTTGCTGATGAAATGGGTCTTGGTAAGACCTTACAAACCATCTCTTTGCTGGCGTACCTGCATGAATTTAGAGGGATTACTGGTCCTCACATGGTTGTTGCTCCAAAATCCACACTAGGCAATTGGATGAATGAAATCAAACGTTTTTGTCCTATCATACGTGCTGTAAAGTTCCTTGGGAACCCTGAAGAAAGGAGATACATTCGAGAGGATTTGCTAGTTGCTGGGAAGTTTGATGTGTGTGTCACAAGTTTTGAGATGGCTATCAAAGAGAAGTCTGCTTTACGACGCTTTAATTGGCGTTACATCATCATTGATGAGGCTCATAGAATCAAGAATGAAAATTCTCTTCTTTCCAAAACCATGAGGCTCTACAGCACTAATTATAGGCTGTTGATCACAGGGACGCCACTTCAGAATAATCTTCATGAGCTCTGGGCGCTTCTGAACTTTTTGCTACCAGAGATCTTTAGCTCGGCTGAGACATTTGATGAGTGGTTTCAAATATCCGGTGAGAATGACCAGCAGGAGGTGGTCCAACAGCTTCATAAGGTCCTTCGTCCATTCCTTCTTAGGAGACTGAAGTCTGATGTTGAGAAAGGTCTGCCTCCAAAGAAGGAAACAATTCTCAAGGTCGGTATGTCTCAGATGCAGAAAAACTACTATCGGGCTTTGTTGCAGAAAGATTTTGAGGTTGTTAATTCTGGAGGAGAGCGCAAGCGTCTTCTTAATATAGCAATGCAGCTCCGAAAATGTTGTAATCATCCATATCTTTTCCAAGGAGCTGAGCCAGGACCTCCATATACAACCGGAGAGCATCTCATAGAAAATGCTGGCAAAATGGTTCTTCTTGATAAGTTGCTTCCTAAGCTGAAGGAACGAGGCTCAAGGGTTTTAATATTTTCGCAGATGACACGGCTACTGGACATCCTTGAAGATTACCTGATGTATCGAGGTCACCAGTATTGTCGGATTGATGGAAACACTGGTGGAGAAGATCGTGATGCTTCTATTGAAGCATATAACAGACCAGGGAGTGAAAAATTTGCCTTCTTATTGTCAACCAGAGCTGGTGGTCTTGGTATCAATCTTGCTACGGCAGATATTGTTATTCTTTATGACAGTGACTGGAATCCACAGGTTGATTTGCAGGCTCAGGACCGCGCCCATAGGATTGGACAGAAGAAGGAAGTCCAAGTATTCCGTTTCTGCACTGAGTATACAATTGAGGAGAAAGTGATTGAAAGGGCTTATAAGAAGCTGGCACTTGATGCACTGGTCATCCAACAGGGACGACTGGCTGAGCAAAAAGCTGTTAATAAGGATGAACTGCTGCAGATGGTGCGGTTTGGTGCTGAAATGGTTTTCAGTTCCAAAGATAGCACTATAACAGATGAGGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCAGCACTTGATGCCAAGATGAAGAAGTTTACAGAAGATGCTATCAAATTTAAAATGGACGATACTGCTGATTTGTATGACTTTGAAGACGAGAAGGATGAAAACAAGGCACATTTCAAGAAAATTGCTGGTGACAATTGGATAGAACCTCCAAGAAGGGAGAGAAAGCGCAATTACTCGGAGTCTGAATATTTCAAGCAAACCATGCGACCAAGTGGTCCTGCTAGACCTAAAGAGCCCAGGATTCCTAGGATGCCTCAGCTGCACGACTTTCAGTTCTTTAATACCCAGAGGCTAAGTGAGCTGTACGAGAAGGAAGTTCGTTTTCTCATGCAAGCTCACCAGAAAAATCAATTAAAAGATAGCATTGAAGTGGAAGAGCCCGAAGATGTCGGAGATCCTTTAACTGCCGACGAGCAGGAAGAGAAGGACAAATTATTAGAAGAAGGATTTTCAACATGGAGTAGGAGAGATTTCAATACTTTTATCAGGGCATGTGAGAAGTATGGTCGGAATGACATAGAAAGTATTGCTGCTGAAATGGAAGGAAAGACAGAGGAGGAGGTTGAAAGATACGCAAATGTTTTCAAAGAAAGATACAAAGAGCTAAATGATTATGATAGGATTATAAAGAATATTGAAAGAGGAGAGGCTAGAATTTCACGAAAAGATGAGATCATGAAAGCAATTGGGAAGAAGTTGGACCGCTACAAGAATCCATGGTTGGAGTTGAAGATTCAGTATGGTCAGAACAAAGGAAAATTGTACAATGAGGAGTGTGATCGTTTCATGATATGTATGGTTCACAAGCTTGGCTATGGAAACTGGGATGAGCTAAAGGCTGCATTCCGAACAGCTCCTTTGTTTCGGTTTGATTGGTTTGTGAAGTCTCGGACAACTCAAGAACTTGCCAGAAGATGTGATACACTTATTCGTTTGGTGGAGAGGGAAAACCAAGAATTTGATGAGAGGGAGAGACAGGCACGCAAAGAAAAGAAACTTGCTAAGAACGCGACACCATCAAAGCGCGCTGTGGCAAGACAAGCAGCCAAAAGCCCTCCCACCTCAAAGAAACGGAAGCAGTCATCAATGGATGATTTTGTGAGCTCGGCCAAGAGAAGAAGTGATGGTACAACCTAGACAGGCTTTTCTTTTTGTGGTTTAGATCCTCTCTTGTGTTTTTCGTTTAACCAGGTTGGTCATCCAGGACACTAACTATGCAATGTGTTGGGCATTGCAAATTGCAATTCTGTCAAGTGCTACAGAGGAAAACCCCACCAATGTATTCAGATATGATGTGTAGGTTTATTGTACATAATCACAATAGAATTCTATTTAGGCTAGTAGTCTTGAACAATGTGGTGCGACACTAATATGTAACTTAATAGATCAACTTGCCAAATTTATGAATTTGCCAGCTCGCTAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g067390.2.1SL2.50ch01:75866987..758775471,066+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g067390.2SL2.50ch01:75866911..7587783310,923+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g067390.2.1.1SL2.50ch01:75866911..75867185275+n/a
exonexon:Solyc01g067390.2.1.10SL2.50ch01:75873657..7587373074+n/a
exonexon:Solyc01g067390.2.1.11SL2.50ch01:75873834..75874054221+2
exonexon:Solyc01g067390.2.1.12SL2.50ch01:75874140..7587422788+n/a
exonexon:Solyc01g067390.2.1.13SL2.50ch01:75874361..7587445494+1
exonexon:Solyc01g067390.2.1.14SL2.50ch01:75874543..75874731189+n/a
exonexon:Solyc01g067390.2.1.15SL2.50ch01:75874858..7587488932+2
exonexon:Solyc01g067390.2.1.16SL2.50ch01:75874991..7587506777+2
exonexon:Solyc01g067390.2.1.17SL2.50ch01:75875153..7587524290+n/a
exonexon:Solyc01g067390.2.1.18SL2.50ch01:75875392..7587546170+1
exonexon:Solyc01g067390.2.1.19SL2.50ch01:75875556..7587561055+1
exonexon:Solyc01g067390.2.1.2SL2.50ch01:75867821..75867946126+n/a
exonexon:Solyc01g067390.2.1.20SL2.50ch01:75875733..7587579159+n/a
exonexon:Solyc01g067390.2.1.21SL2.50ch01:75876103..75876268166+2
exonexon:Solyc01g067390.2.1.22SL2.50ch01:75876768..75876946179+n/a
exonexon:Solyc01g067390.2.1.23SL2.50ch01:75877030..75877245216+2
exonexon:Solyc01g067390.2.1.24SL2.50ch01:75877320..75877421102+n/a
exonexon:Solyc01g067390.2.1.25SL2.50ch01:75877518..75877833316+n/a
exonexon:Solyc01g067390.2.1.3SL2.50ch01:75868047..75868153107+n/a
exonexon:Solyc01g067390.2.1.4SL2.50ch01:75868785..75868891107+n/a
exonexon:Solyc01g067390.2.1.5SL2.50ch01:75871827..7587192498+1
exonexon:Solyc01g067390.2.1.6SL2.50ch01:75872026..75872205180+2
exonexon:Solyc01g067390.2.1.7SL2.50ch01:75872287..75872508222+n/a
exonexon:Solyc01g067390.2.1.8SL2.50ch01:75872954..75873088135+n/a
exonexon:Solyc01g067390.2.1.9SL2.50ch01:75873281..75873563283+n/a
intronintron:Solyc01g067390.2.1.1SL2.50ch01:75867186..75867820n/a+n/a
intronintron:Solyc01g067390.2.1.10SL2.50ch01:75873731..75873833n/a+n/a
intronintron:Solyc01g067390.2.1.11SL2.50ch01:75874055..75874139n/a+n/a
intronintron:Solyc01g067390.2.1.12SL2.50ch01:75874228..75874360n/a+n/a
intronintron:Solyc01g067390.2.1.13SL2.50ch01:75874455..75874542n/a+n/a
intronintron:Solyc01g067390.2.1.14SL2.50ch01:75874732..75874857n/a+n/a
intronintron:Solyc01g067390.2.1.15SL2.50ch01:75874890..75874990n/a+n/a
intronintron:Solyc01g067390.2.1.16SL2.50ch01:75875068..75875152n/a+n/a
intronintron:Solyc01g067390.2.1.17SL2.50ch01:75875243..75875391n/a+n/a
intronintron:Solyc01g067390.2.1.18SL2.50ch01:75875462..75875555n/a+n/a
intronintron:Solyc01g067390.2.1.19SL2.50ch01:75875611..75875732n/a+n/a
intronintron:Solyc01g067390.2.1.2SL2.50ch01:75867947..75868046n/a+n/a
intronintron:Solyc01g067390.2.1.20SL2.50ch01:75875792..75876102n/a+n/a
intronintron:Solyc01g067390.2.1.21SL2.50ch01:75876269..75876767n/a+n/a
intronintron:Solyc01g067390.2.1.22SL2.50ch01:75876947..75877029n/a+n/a
intronintron:Solyc01g067390.2.1.23SL2.50ch01:75877246..75877319n/a+n/a
intronintron:Solyc01g067390.2.1.24SL2.50ch01:75877422..75877517n/a+n/a
intronintron:Solyc01g067390.2.1.3SL2.50ch01:75868154..75868784n/a+n/a
intronintron:Solyc01g067390.2.1.4SL2.50ch01:75868892..75871826n/a+n/a
intronintron:Solyc01g067390.2.1.5SL2.50ch01:75871925..75872025n/a+n/a
intronintron:Solyc01g067390.2.1.6SL2.50ch01:75872206..75872286n/a+n/a
intronintron:Solyc01g067390.2.1.7SL2.50ch01:75872509..75872953n/a+n/a
intronintron:Solyc01g067390.2.1.8SL2.50ch01:75873089..75873280n/a+n/a
intronintron:Solyc01g067390.2.1.9SL2.50ch01:75873564..75873656n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17680587%2Fdetails feature 17680587
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