Solanum lycopersicum mRNA Solyc01g056720.2.1
mRNA details
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| Name | Type |
Length
1,154
|
Organism |
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Description
Aquaporin SIP12 (AHRD V1 ***- D8FSL5_GOSHI); contains Interpro domain(s) IPR000425 Major intrinsic protein
|
|
Location(s)
SL2.50ch01:56282037..56292081
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- Length
- 10045
- Sifter term
- GO:0015250
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g056720.2.1 Aquaporin SIP12 (AHRD V1 ***- D8FSL5_GOSHI); contains Interpro domain(s) IPR000425 Major intrinsic protein
CGAAAATGGGAAAAAGAAAAAGAGATAAAAGATTGACCTGTTTCGTAGCAATTCCGATAAAGATGCTGACAACAGCCACAATAATGAGTCCCCGACGACCGACGTCAACATAAGTAAGGAAACCGAAACCGAAAGCTTAGCCACACAGACCCTTCCTCAGTAACTCCTTCGTCTCCAAACAAACAAGGAAAAGACGAAATGGGGGTAAGCAGGAGAAGCCTTGTGATTTCAGATTTCATCATGTCTTTCATGTGGGTTTGGTCAAGTGTGCTTATTAAGATGTTTGTTCATAAAATCTTGGGTTATGGGGCTCATGATCTCAAAGGTGGGGCATACAACCCTCTCACTATATTATCTGGTGCCATCTCCGGGGATCTCACCAATTTCATCTTCACTGTTGCTGCTAGAATTCCTTCTCAGGTCTTTGGTTCAATTACTGGGGTTAGATTCATCATTGCGGCATTTCCAAACATAGGACGTGGACCTGTTTTGAGCATTGACATTCATCGAGGTGCATTGACAGAAGGAATTTTGACATTTGCAATTGTTAGCATTTCACTTGGACTTTCCAGAAGAAGTCGAGCGAGTACTTTCATGAAGACATGGATATCCAGTCTATCCAAACTGACTCTTCACATTCTTGGTTCTGATCTAACAGGGGGATGCATGAATCCAGCTTCTGTGATGGGGTGGGCTTATGCGCGGGGTGATCATATTACTAAGGAGCATATACATGTTTATTGGCTTGCTCCAATTCAAGCAACTTTGTTGGCTGTTTGGACTTTCAATTTGCTAGTTTCCCCATCAAAGGACAAAGAAGCAAAGAAGACGGAGAAAAAGTCAGAATGATTCATCATTCTTTTCTGGTTCAGAAACTACATGTATCAACTTACTTCTCTTTCTTTTCAAAAACTTAATTTGAAAAGGGTTCAGTTAAGGGATGTATTATTTTGCCTCAATATAATGTTAACCTCCCCTGTGTTTGAATTATTGATGAAAATCCCCAATCTATGTTGGATTTCTTATGAAACAATTAAACAGCAAAAAAAGAAAATTGTAGAGAATGTTGTAAATTTATCATATTAGTGTGGATGCCAGTAACTTCAAGGTGTAATTCCACCATTATGTGTAGTAATACCAACACTTCCGTACTT
CGAAAATGGGAAAAAGAAAAAGAGATAAAAGATTGACCTGTTTCGTAGCAATTCCGATAAAGATGCTGACAACAGCCACAATAATGAGTCCCCGACGACCGACGTCAACATAAGTAAGGAAACCGAAACCGAAAGCTTAGCCACACAGACCCTTCCTCAGTAACTCCTTCGTCTCCAAACAAACAAGGAAAAGACGAAATGGGGGTAAGCAGGAGAAGCCTTGTGATTTCAGATTTCATCATGTCTTTCATGTGGGTTTGGTCAAGTGTGCTTATTAAGATGTTTGTTCATAAAATCTTGGGTTATGGGGCTCATGATCTCAAAGGTGGGGCATACAACCCTCTCACTATATTATCTGGTGCCATCTCCGGGGATCTCACCAATTTCATCTTCACTGTTGCTGCTAGAATTCCTTCTCAGGTCTTTGGTTCAATTACTGGGGTTAGATTCATCATTGCGGCATTTCCAAACATAGGACGTGGACCTGTTTTGAGCATTGACATTCATCGAGGTGCATTGACAGAAGGAATTTTGACATTTGCAATTGTTAGCATTTCACTTGGACTTTCCAGAAGAAGTCGAGCGAGTACTTTCATGAAGACATGGATATCCAGTCTATCCAAACTGACTCTTCACATTCTTGGTTCTGATCTAACAGGGGGATGCATGAATCCAGCTTCTGTGATGGGGTGGGCTTATGCGCGGGGTGATCATATTACTAAGGAGCATATACATGTTTATTGGCTTGCTCCAATTCAAGCAACTTTGTTGGCTGTTTGGACTTTCAATTTGCTAGTTTCCCCATCAAAGGACAAAGAAGCAAAGAAGACGGAGAAAAAGTCAGAATGATTCATCATTCTTTTCTGGTTCAGAAACTACATGTATCAACTTACTTCTCTTTCTTTTCAAAAACTTAATTTGAAAAGGGTTCAGTTAAGGGATGTATTATTTTGCCTCAATATAATGTTAACCTCCCCTGTGTTTGAATTATTGATGAAAATCCCCAATCTATGTTGGATTTCTTATGAAACAATTAAACAGCAAAAAAAGAAAATTGTAGAGAATGTTGTAAATTTATCATATTAGTGTGGATGCCAGTAACTTCAAGGTGTAATTCCACCATTATGTGTAGTAATACCAACACTTCCGTACTT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g056720.2.1 | SL2.50ch01:56282341..56291883 | 217 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g056720.2 | SL2.50ch01:56282037..56292081 | 10,045 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g056720.2.1.1 | SL2.50ch01:56291757..56292081 | 325 | - | 2 |
| exon | exon:Solyc01g056720.2.1.2 | SL2.50ch01:56291590..56291684 | 95 | - | n/a |
| exon | exon:Solyc01g056720.2.1.3 | SL2.50ch01:56282597..56282857 | 261 | - | n/a |
| exon | exon:Solyc01g056720.2.1.4 | SL2.50ch01:56282037..56282509 | 473 | - | n/a |
| intron | intron:Solyc01g056720.2.1.2 | SL2.50ch01:56291685..56291756 | n/a | - | n/a |
| intron | intron:Solyc01g056720.2.1.3 | SL2.50ch01:56282858..56291589 | n/a | - | n/a |
| intron | intron:Solyc01g056720.2.1.4 | SL2.50ch01:56282510..56282596 | n/a | - | n/a |
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mRNA details
mRNA details

