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Solanum lycopersicum mRNA Solyc01g009010.2.1

mRNA details  
Name
Solyc01g009010.2.1
Type
mRNA
Length
1,677
Organism
Solanum lycopersicum
Description
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (AHRD V1 ***- A4USB3_NICBE); contains Interpro domain(s) IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
Location(s)
SL2.50ch01:3014153..3020442
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016114
  • GO:0016310
Length
6290
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g009010.2.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (AHRD V1 ***- A4USB3_NICBE); contains Interpro domain(s) IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase

TACAAAAAAGAAAAAATTCTGTTAAACACATTTCTGAAATCCTTCTTTCCCCTTTTTTGTCATGTGTTATATATCTTTACCTACCTGAGAAGTGAAAACTCACCAAAATAAGAGTAAAGTTTGAGTCTTTTTGAATTTTATTGGCAAGAAACACACTTCTTGAAAAATGGGGTTGAGGAATTGAATCATTTTGTTCAAATTTTGCTTTTTATTTCACTTGGAAACACAGTAGCTATGGCTTCCTGTAATATTCTTTGTAGTGTCAAACCCCAAATTGATTCTTTTAAAAAGAGTTGTTTTTTTCAGTCATGGTCAAATAGGCCACATGGTTCATCCTATTTTAACAAGAATATTCAATTTAGAAGAAACAGTTTTGTTATTGTGAAGGCTTCAGGTTCAAGAACTAGTAAAAAACAAGTAGAGATAACATATAATCCTGAAGAGAAGTTTAATAAATTAGCTGATGAAGTGGATAGAGAAGCTGGGCTTTCAAGACTCACTCTTTTTTCTCCTTGCAAGATAAATGTTTTCTTGAGAATAACAAGCAAGAGGGATGACGGATATCATGATTTGGCGTCTCTCTTTCATGTAATTAGTCTAGGAGATAAAATAAAGTTCTCGCTGTCACCATCGAAGTCAAAGGATCGTTTATCTACTAATGTTGCTGGAGTTCCACTCGATGAGAGAAATCTGATTATAAAGGCCCTCAATCTTTATAGGAAAAAGACTGGAACAGACAATTACTTTTGGATTCATCTTGATAAGAAAGTGCCTACTGGAGCTGGTCTTGGTGGTGGGAGCAGTAATGCTGCAACAACTCTGTGGGCAGCAAATCAATTCAGTGGTTGTGTTGCCACTGAAAAGGAGCTCCAAGAGTGGTCTGGTGAGATTGGTTCTGATATTCCTTTCTTCTTCTCTCATGGAGCAGCCTACTGTACGGGTAGGGGTGAGGTTGTTCAGGATATCCCGTCACCCATACCATTTGACATTCCAATGGTCCTCATAAAGCCTCAACAGGCATGCTCCACTGCTGAAGTTTACAAGCGTTTTCAGTTGGATCTGTCTAGTAAGGTTGATCCCTTGAGCTTACTGGAGAAAATCTCAACTAGTGGAATATCTCAAGATGTGTGTGTCAATGATTTAGAACCTCCTGCCTTTGAAGTTCTTCCATCTCTTAAAAGGTTAAAACAACGAGTAATTGCTGCTGGCCGAGGACAATATGATGCAGTCTTCATGTCTGGAAGTGGAAGCACAATAGTAGGGGTTGGCTCTCCAGATCCACCACAATTTGTCTATGATGATGAAGAATACAAGGATGTCTTCTTGTCAGAAGCAAGTTTCATCACTCGACCAGCCAACGAGTGGTATGTTGAACCTGTTTCAGGTAGCACTATTGGTGATCAACCTGAGTTCTCTACATCTTTTGACATGTCTTAAAAGGCTCAGAAGAGCCTGTAAAATTGAAGCAATAGGAGAAGTTTTTGTTGTAAATGTTATATCCTATAATTTCTGTAGTATCATCCTTTTACTTTGGATGCACTATTCAAGAAAATAAAATTAGTCACAATCTGATCGAAGTGACAAATGAGCGAGTTAGGTTAAATTTGAACAGGTCAAATCAATAAACATACCCACCCGTTCAAAATTTACTTGGGTTGAAATGAATTTATTCGCGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g009010.2.1SL2.50ch01:3014386..3020202401+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g009010.2SL2.50ch01:3014153..30204426,290+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g009010.2.1.1SL2.50ch01:3014153..3014575423+n/a
exonexon:Solyc01g009010.2.1.10SL2.50ch01:3019015..301910086+2
exonexon:Solyc01g009010.2.1.11SL2.50ch01:3020096..3020442347+1
exonexon:Solyc01g009010.2.1.2SL2.50ch01:3015355..301545096+n/a
exonexon:Solyc01g009010.2.1.3SL2.50ch01:3015556..301562469+n/a
exonexon:Solyc01g009010.2.1.4SL2.50ch01:3015952..3016056105+n/a
exonexon:Solyc01g009010.2.1.5SL2.50ch01:3016147..301620357+n/a
exonexon:Solyc01g009010.2.1.6SL2.50ch01:3016299..3016499201+n/a
exonexon:Solyc01g009010.2.1.7SL2.50ch01:3017368..301746093+n/a
exonexon:Solyc01g009010.2.1.8SL2.50ch01:3017547..3017646100+n/a
exonexon:Solyc01g009010.2.1.9SL2.50ch01:3018607..3018706100+n/a
intronintron:Solyc01g009010.2.1.1SL2.50ch01:3014576..3015354n/a+n/a
intronintron:Solyc01g009010.2.1.10SL2.50ch01:3019101..3020095n/a+n/a
intronintron:Solyc01g009010.2.1.2SL2.50ch01:3015451..3015555n/a+n/a
intronintron:Solyc01g009010.2.1.3SL2.50ch01:3015625..3015951n/a+n/a
intronintron:Solyc01g009010.2.1.4SL2.50ch01:3016057..3016146n/a+n/a
intronintron:Solyc01g009010.2.1.5SL2.50ch01:3016204..3016298n/a+n/a
intronintron:Solyc01g009010.2.1.6SL2.50ch01:3016500..3017367n/a+n/a
intronintron:Solyc01g009010.2.1.7SL2.50ch01:3017461..3017546n/a+n/a
intronintron:Solyc01g009010.2.1.8SL2.50ch01:3017647..3018606n/a+n/a
intronintron:Solyc01g009010.2.1.9SL2.50ch01:3018707..3019014n/a+n/a
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Related viewsNone found
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