Solanum lycopersicum mRNA Solyc01g008820.2.1

mRNA details  
Name
Solyc01g008820.2.1
Type
mRNA
Length
1,454
Organism
Solanum lycopersicum
Description
Signal peptide peptidase family protein (AHRD V1 ***- D7LQE4_ARALY); contains Interpro domain(s) IPR007369 Peptidase A22B, signal peptide peptidase
Location(s)
SL2.50ch01:2843927..2849931
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016021
Length
6005
Nb exon
12
Sifter term
  • GO:0005515
  • GO:0042500
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g008820.2.1 Signal peptide peptidase family protein (AHRD V1 ***- D7LQE4_ARALY); contains Interpro domain(s) IPR007369 Peptidase A22B, signal peptide peptidase

CCAAATATATATATATAAATAATAAGAAAAAAAAATAAAAAATCCAAAAACGTTACAAAAAATTCTATCTTGTTGAAAAATCTCATCTTGATCTGTCTACTCGGAGATCAGCAATTTTACTTCTGTTTTGTAAGCTTATCTCTGTTGCTGTGGGAAGAAAACTAAGTGTTTTCTGAGTTAGTAGTCTGTGAGGATGATGAATAGTGAACGATTAGCAAATGTTGCTTTAGCAGGTTTGAGTTTGGCCCCACTGGTTGTGAATGTGGACCCAAATTTGAATGTCGTGCTAACGGCTTGTCTCACTGTTTTTGTGGGTTGCTACCGTTCTGTTAAGCCTACTCCACCTACGGAGACAATGTCTAAGGAACATGCAATGAGATTCCCCTTGGTTGGAAGTGCAATGCTCTTGTCATTGTTCTTGCTTTTTAAGTTCCTCTCAAAAGACCTGGTTAATGCTGTATTGACGTGCTACTTTTTTGTACTTGGCATTGCTGCTTTTGCTGCAACACTGTTACCTGCTATCAAACGATTCTTGCCGGAAAAGTGGAATGAAGATCTCGTAATATGGCACTTCCCATATTTCCGCTCTTTGGAGTTTGAGTTCACAAGGTCCCAGATTGTTGCTGCAATTCCTGGAACCATGTTCTGTGTATGGTATGCTAAACAGAAGCATTGGCTAGCTAACAATGTATTGGGCCTTGCATTTTCTATTCAGGGGATTGAAATGCTTTCCCTTGGATCATTTAAGACTGGTGCCATACTATTGGCTGGACTTTTTGTGTATGACATCTTTTGGGTCTTTTTTACCCCAGTGATGGTTAGTGTTGCTAAGTCTTTTGATGCTCCTATCAAGCTTTTGTTCCCCACAGCGGATTTGAAACGTCCCTTTTCAATGTTGGGTCTCGGAGATATTGTAATTCCTGGCATTTTTGTGGCTTTGGCACTCCGCTTTGATGTCTCCAGAGGAAAGGGGCCTCAATACTTTATAAGTGCATTTTCGGGATACGCTGTTGGTGTGATTTCAACCATTATTGTGATGAACTGGTTTCAAGCTGCACAGCCCGCGTTGTTGTATATTGTTCCAGCTGTAATTGGATTTGTGGCTGTGCACTGCATTTGGAATGGGGATATGAAGCCGTTGTTGGAGTTCGATGAGTCGAAAACACAGAGCACTGAAGAAGTCGCCGCGGAAGAGAGCAAGAAAGTAGAGTGAGGCTTTAAGAAGAGTTACAGTAGGGATATATGACCTTCCAACTGATGCAGAGATTGTTGGTTAGGAAAAGAACTTTTTTTTGTTTTGTACTTTTAGATTATTGTTTAGTGAAATATTGATGAGATTGGCTTCAATGTTATTTACCCAAAAAATTTAACATTTCAATTGTCAATCTTAATATTATTGCCCCTAACTCCATGAGATTTGAAGTTGGTTAATCTTTGCAATTATGAGGTAGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g008820.2.1SL2.50ch01:2844559..2849690339+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g008820.2SL2.50ch01:2843927..28499316,005+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g008820.2.1.1SL2.50ch01:2843927..2844060134+n/a
exonexon:Solyc01g008820.2.1.10SL2.50ch01:2848697..2848833137+n/a
exonexon:Solyc01g008820.2.1.11SL2.50ch01:2848950..284902778+2
exonexon:Solyc01g008820.2.1.12SL2.50ch01:2849616..2849931316+n/a
exonexon:Solyc01g008820.2.1.2SL2.50ch01:2844498..284459699+n/a
exonexon:Solyc01g008820.2.1.3SL2.50ch01:2845956..2846071116+n/a
exonexon:Solyc01g008820.2.1.4SL2.50ch01:2846160..2846311152+2
exonexon:Solyc01g008820.2.1.5SL2.50ch01:2846427..284651286+n/a
exonexon:Solyc01g008820.2.1.6SL2.50ch01:2846843..2846970128+1
exonexon:Solyc01g008820.2.1.7SL2.50ch01:2847764..284781451+2
exonexon:Solyc01g008820.2.1.8SL2.50ch01:2848296..284838287+n/a
exonexon:Solyc01g008820.2.1.9SL2.50ch01:2848496..284856570+n/a
intronintron:Solyc01g008820.2.1.1SL2.50ch01:2844061..2844497n/a+n/a
intronintron:Solyc01g008820.2.1.10SL2.50ch01:2848834..2848949n/a+n/a
intronintron:Solyc01g008820.2.1.11SL2.50ch01:2849028..2849615n/a+n/a
intronintron:Solyc01g008820.2.1.2SL2.50ch01:2844597..2845955n/a+n/a
intronintron:Solyc01g008820.2.1.3SL2.50ch01:2846072..2846159n/a+n/a
intronintron:Solyc01g008820.2.1.4SL2.50ch01:2846312..2846426n/a+n/a
intronintron:Solyc01g008820.2.1.5SL2.50ch01:2846513..2846842n/a+n/a
intronintron:Solyc01g008820.2.1.6SL2.50ch01:2846971..2847763n/a+n/a
intronintron:Solyc01g008820.2.1.7SL2.50ch01:2847815..2848295n/a+n/a
intronintron:Solyc01g008820.2.1.8SL2.50ch01:2848383..2848495n/a+n/a
intronintron:Solyc01g008820.2.1.9SL2.50ch01:2848566..2848696n/a+n/a
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Related viewsNone found
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