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Solanum lycopersicum mRNA Solyc01g008710.2.1

mRNA details  
Name
Solyc01g008710.2.1
Type
mRNA
Length
1,445
Organism
Solanum lycopersicum
Description
Mannan endo-1 4-beta-mannosidase (AHRD V1 ***- D2S259_HALTV); contains Interpro domain(s) IPR018087 Glycoside hydrolase, family 5, conserved site IPR013781 Glycoside hydrolase, subgroup, catalytic core
Location(s)
SL2.50ch01:2755066..2758116
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005975
Length
3051
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g008710.2.1 Mannan endo-1 4-beta-mannosidase (AHRD V1 ***- D2S259_HALTV); contains Interpro domain(s) IPR018087 Glycoside hydrolase, family 5, conserved site IPR013781 Glycoside hydrolase, subgroup, catalytic core

ATAACATCAAATATAAACACCAATTTCCTCCCTATTTTTTTTCTCCTTTTTGCATTATTAAAAAAAATATTGATGAATAACTCAATCATCTTAATTTTTGTTGCTATTTTAATAATATTTCCAAATGAATTTAGCAAGCCTACTAGAGCTTTTTCAAATAATAATTTTGTTTATACAGATGGAACTCATTTTGCATTAAATGGAAAGTCACTTTATATAAATGGTTTTAATGCATATTGGTTAATGTATATAGCTTATGATCCATCAACAAGAATTAAAGTTACAAATACATTCCAACAAGCTTCTAAATATAAAATGAATGTTGCTAGAACTTGGGCTTTTTCTCATGGTGGTTCTAGACCTTTACAATCTGCACCTGGTGTTTACAACGAACAAATGTTTCAGGGATTGGATTTTGTGATATCAGAAGCTAAAAAATATGGAATTCACTTAATTATGTCATTAGTCAATAATTGGGATGCTTTTGGAGGAAAGAAACAATATGTAGAATGGGCAGTGCAAAGAGGGCAGAAATTAACAAGTGATGATGATTTCTTCACTAATCCTATGGTCAAAGGATTCTACAAAAATAATGTCAAGGTTGTGCTTACAAGAGTGAATACAATAACCAAAGTAGCATATAAAGATGATCCAACAATTCTTTCATGGGAATTAATAAATGAGCCTAGATGCCCATCTGACCTCTCTGGGAAAACATTTCAGAACTGGGTTTTAGAAATGGCGGGATATTTGAAATCAATAGATTCAAATCATCTCTTGGAGATTGGACTTGAAGGATTTTATGGGAATGACATGAGACAATACAATCCTAATTCTTACATTTTTGGGACTAATTTTATCTCCAACAATCAAGTTCAAGGAATTGATTTTACCACAATTCATATGTACCCTAATCAATGGTTGCCAGGTTTAACTCAAGAGGCCCAAGACAAATGGGCTTCACAATGGATCCAAGTCCATATAGATGACTCCAAAATGTTGAAAAAGCCCTTATTAATTGCAGAATTTGGCAAGTCTACAAAAACCCCAGGGTATACTGTTGCAAAGAGGGATAATTATTTTGAAAAAATATATGGAACCATTTTTAATTGTGCCAAAAGTGGAGGCCCATGTGGTGGTGGGCTTTTTTGGCAAGTATTGGGCCAAGGAATGTCAAGTTTTGATGATGGTTATCAAGTGGTCTTGCAAGAGAGCCCATCAACTTCTAGAGTTATACTCTTACAATCTCTTAGGCTCTCTAAGCTATCATAGAAACAAAAATAGATTGAAGGCTATAGTAGTATTTTTAAGATCCATGAAAAGTTGTTTGGGTTGGCATATACTATTAATCATCTGGTTGAGTTATAGTATTGATTATAATTATGTATAAATACTTTGTATACATGTTATTTATTAAAAATAAAATAAAGTATTTTGTTTGAATA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g008710.2.1SL2.50ch01:2755137..2757943400+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g008710.2SL2.50ch01:2755066..27581163,051+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g008710.2.1.1SL2.50ch01:2755066..2755470405+n/a
exonexon:Solyc01g008710.2.1.2SL2.50ch01:2755538..2755732195+n/a
exonexon:Solyc01g008710.2.1.3SL2.50ch01:2756566..2756688123+n/a
exonexon:Solyc01g008710.2.1.4SL2.50ch01:2756795..2756991197+n/a
exonexon:Solyc01g008710.2.1.5SL2.50ch01:2757592..2758116525+n/a
intronintron:Solyc01g008710.2.1.1SL2.50ch01:2755471..2755537n/a+n/a
intronintron:Solyc01g008710.2.1.2SL2.50ch01:2755733..2756565n/a+n/a
intronintron:Solyc01g008710.2.1.3SL2.50ch01:2756689..2756794n/a+n/a
intronintron:Solyc01g008710.2.1.4SL2.50ch01:2756992..2757591n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17670089%2Fdetails feature 17670089
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