Solanum lycopersicum mRNA Solyc01g007880.2.1
 mRNA details
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| Name | Type |
Length
2,652
|
Organism |
|
Description
MORN repeat protein (AHRD V1 *--- D4V7H0_BACVU); contains Interpro domain(s) IPR019746 Tubulin/FtsZ, N-terminal
|
|
Location(s)
SL2.50ch01:2041549..2055134
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0043234
- Length
- 13586
- Nb exon
- 16
- Sifter term
- GO:0005515
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g007880.2.1 MORN repeat protein (AHRD V1 *--- D4V7H0_BACVU); contains Interpro domain(s) IPR019746 Tubulin/FtsZ, N-terminal
ATGGACCTTCTACTTCCGATTCCGGCGAGACTTTCTACATTTTCACGCGCCGCCGTGTGTACTTTTTCTCCGGCGAATCCTTTCAATTCCAACTCATTTACATGCAGGAAGGTTAGATTTAGAGTGAGTTGTTGTACGAAGCCTGTGCGAGTGGAAACGAACTCAAATTTCAACAGAAGAGATGGTAATAACTGTGAAGTGAATCGTGAAGATGATGATACAGGGGAGGCAGGCGGTCTGAAGAATGTGTGGGAAGAGACGGAGTTTGTGGAGGTGTTTGGAATTGGAAGCAGGAAAGACGCTCTGCTTGAGTTCTGCTTGGCTTCACCTTATCTTTCTCCGGCGTTGAGATTTTGGAATGTTCTCGTGAAAGACTCTGAGAAGGTGCTATTACAAGAGAAAGTGCCTATAGAAGATGTTTCTTCAAGAATTGTGGAAGTTCCATCAGCAATAAATTCATGTTCCAAAGCAGTTATACTTGTGGCTAGTGCAGCTTATGGCACCGATCATGTCCCAGCACTTGATATTATAAGGAAATTAAAGTCCAGAAATGGACTAGCGGTCGGCATCATTCTGAAACCTTTCAGCTTTGAAGGACGAAGGCGCTATGATGAGGTCACGGATTTGATTGACAAACTTCAAAAGCATGCAACTGTTTGTATAGTTATTGACACTGATGGTCTTCTCAAGAAAGATCTTTTAACTCTGGATGAAGCTTTGAAGACTTCATATAATGCTGTTCTAATGGCTGTTAATGCCATTTCAATTCTTATGTCTGAGGACCACATAAAGCTTCTAGATGCGACAGATTGTGGTACAAAAGAACTGAGTGGTCCAGAGCTAATAAAAATTCTTGAAAGCTACAAAGAGGCAAAAACTGGATTCGGAGCTGGCTACAATGTCGAAACTTCAATTCTGCGAGCTGTATACGACTGCCCGTTCCTTGGTTTGGGAGTGAAGGGGTCAAATGGTGTGGTTATATGCATCATTGCTAGTTCAGGTGTTGTAAATTCCAGTGATGTGCGTAGCATCTTGCGCACGTTTCGCCAAACTACTGGATGTAATGGAGACATTGTGATATCAATTGTCCAGGAAGCCAATTTGGAGCCAAATTTAATAGTTACTACTGTAGTGACATGTGGGTACGCTACACAGGAACCATCTGAAAAAAGTAGCTTATTTTCTAGACTAGCGCAACATATTCCTTTCATTTTTAATATCCTTAAGAAGCCAGATCCATCACTTCTAACTGCCAAAGAGAGTGAAATTGATGAGAGTCCAGAAACTTCTGATATGGCAGAATTTGTTTCTATGGATAATACACCTGAGGATATGTCCATCTATTCTGGGGAACTGCCGGCATTATTTCCTACCAATGGTGAAGAAACATCCTTTTTGAGAGATTATAATAATGTCTCTGATGAAAGGAAGATTGAACTGTCAAATTCTGATGTTGCAACTGAAGCACCTCTTGTTTTCAAAAGAGAGCTGCTCACAAGATGGAATCCGGGTCCAGGAAAAGACACTTCAGAAGGCTTAGCTGCAGAAGGGACTGAAAACTCGGAAGGCAAAAACACGGTTGACAATACCAGCACCTACAAACTTCCAGTTGGTGTAAAGCATAAAGAACAGTTGCAAACTAGTGCAGGTTCCTCAAACTCAAGAAATTCAGGGAGGAAATCTGAAGAAAGTAAAGTTGCACAGCCTAGAGATATCTCAAATCTATCTCAGGATGAAGTAGATGAAGATTACAGCGAAATTATTTCAGATGTTTACAACTCCAACCTTCCCTTAGTTGAAAAAAGCTACACCAGTGGCCCAAAAAGGAAAGGAGTTCTGTCTACTCGGGCAGCCTCTATGCTGGAAGCTGAACGGGATTCAAAAAAGAAGTGGATCCCTGTCGTTGAAATGAAATACAGGGGAGGTATATACAGAGGTCGCATTGAAGGAGGCCTCCCAGAAGGAAAGGGCTGCCTGTCTCTTGAAGATGGAAGCAAATACGATGGTATGTGGCGCTACGGGAAGAAGTCAGGGTTGGGTACATTTTACTTCAATAACGGTGATACTTATCGGGGTTCATGGAGAGATGATCTCATGCATGGAAAGGGATGGTTTTACTTTCATACTGGGGATCGATGGTTTGCGAACTTCTGGAAGGGAAAGGCTAATGGAGAAGCCCGTTTCTATTCCAAACTTGGTGATGTTTTCTTTGGTCACTTTAAAGATGGATTGCGCCATGGTCAATTTCTCTGTATCAACATTGATGGGACGAGGAGTATAGAGGAATGGGATGAAGGCCTTCTTCAAAGCCGAAAGAATTTGGATTCTGATGCAGAAACCGGGTAGACTGTCTATCGTATCTGTAAAAATATACGATCCTTCGTACATTCTTGGTGTACTAGAGAAACAAATGGCAGAAATATATCAAGCAGGGGCGGGCGGATGCCTATTACGAAGAGTTTTCTTCAATCAGCTTCAATGATCATAACAAAACTATGCTGTAGCAGTAGCAGCAGCTCAGAGTATTATATGAACATCCTCTAAGCATTTGGTTCTTTATTTGACTGGTGAAATCCAATTTGAAAATCTCCAATTCTAACAGATCTTGTATATTATGTAAATAGTAATTTAAAGTTATCTTTTTACATCTAG
ATGGACCTTCTACTTCCGATTCCGGCGAGACTTTCTACATTTTCACGCGCCGCCGTGTGTACTTTTTCTCCGGCGAATCCTTTCAATTCCAACTCATTTACATGCAGGAAGGTTAGATTTAGAGTGAGTTGTTGTACGAAGCCTGTGCGAGTGGAAACGAACTCAAATTTCAACAGAAGAGATGGTAATAACTGTGAAGTGAATCGTGAAGATGATGATACAGGGGAGGCAGGCGGTCTGAAGAATGTGTGGGAAGAGACGGAGTTTGTGGAGGTGTTTGGAATTGGAAGCAGGAAAGACGCTCTGCTTGAGTTCTGCTTGGCTTCACCTTATCTTTCTCCGGCGTTGAGATTTTGGAATGTTCTCGTGAAAGACTCTGAGAAGGTGCTATTACAAGAGAAAGTGCCTATAGAAGATGTTTCTTCAAGAATTGTGGAAGTTCCATCAGCAATAAATTCATGTTCCAAAGCAGTTATACTTGTGGCTAGTGCAGCTTATGGCACCGATCATGTCCCAGCACTTGATATTATAAGGAAATTAAAGTCCAGAAATGGACTAGCGGTCGGCATCATTCTGAAACCTTTCAGCTTTGAAGGACGAAGGCGCTATGATGAGGTCACGGATTTGATTGACAAACTTCAAAAGCATGCAACTGTTTGTATAGTTATTGACACTGATGGTCTTCTCAAGAAAGATCTTTTAACTCTGGATGAAGCTTTGAAGACTTCATATAATGCTGTTCTAATGGCTGTTAATGCCATTTCAATTCTTATGTCTGAGGACCACATAAAGCTTCTAGATGCGACAGATTGTGGTACAAAAGAACTGAGTGGTCCAGAGCTAATAAAAATTCTTGAAAGCTACAAAGAGGCAAAAACTGGATTCGGAGCTGGCTACAATGTCGAAACTTCAATTCTGCGAGCTGTATACGACTGCCCGTTCCTTGGTTTGGGAGTGAAGGGGTCAAATGGTGTGGTTATATGCATCATTGCTAGTTCAGGTGTTGTAAATTCCAGTGATGTGCGTAGCATCTTGCGCACGTTTCGCCAAACTACTGGATGTAATGGAGACATTGTGATATCAATTGTCCAGGAAGCCAATTTGGAGCCAAATTTAATAGTTACTACTGTAGTGACATGTGGGTACGCTACACAGGAACCATCTGAAAAAAGTAGCTTATTTTCTAGACTAGCGCAACATATTCCTTTCATTTTTAATATCCTTAAGAAGCCAGATCCATCACTTCTAACTGCCAAAGAGAGTGAAATTGATGAGAGTCCAGAAACTTCTGATATGGCAGAATTTGTTTCTATGGATAATACACCTGAGGATATGTCCATCTATTCTGGGGAACTGCCGGCATTATTTCCTACCAATGGTGAAGAAACATCCTTTTTGAGAGATTATAATAATGTCTCTGATGAAAGGAAGATTGAACTGTCAAATTCTGATGTTGCAACTGAAGCACCTCTTGTTTTCAAAAGAGAGCTGCTCACAAGATGGAATCCGGGTCCAGGAAAAGACACTTCAGAAGGCTTAGCTGCAGAAGGGACTGAAAACTCGGAAGGCAAAAACACGGTTGACAATACCAGCACCTACAAACTTCCAGTTGGTGTAAAGCATAAAGAACAGTTGCAAACTAGTGCAGGTTCCTCAAACTCAAGAAATTCAGGGAGGAAATCTGAAGAAAGTAAAGTTGCACAGCCTAGAGATATCTCAAATCTATCTCAGGATGAAGTAGATGAAGATTACAGCGAAATTATTTCAGATGTTTACAACTCCAACCTTCCCTTAGTTGAAAAAAGCTACACCAGTGGCCCAAAAAGGAAAGGAGTTCTGTCTACTCGGGCAGCCTCTATGCTGGAAGCTGAACGGGATTCAAAAAAGAAGTGGATCCCTGTCGTTGAAATGAAATACAGGGGAGGTATATACAGAGGTCGCATTGAAGGAGGCCTCCCAGAAGGAAAGGGCTGCCTGTCTCTTGAAGATGGAAGCAAATACGATGGTATGTGGCGCTACGGGAAGAAGTCAGGGTTGGGTACATTTTACTTCAATAACGGTGATACTTATCGGGGTTCATGGAGAGATGATCTCATGCATGGAAAGGGATGGTTTTACTTTCATACTGGGGATCGATGGTTTGCGAACTTCTGGAAGGGAAAGGCTAATGGAGAAGCCCGTTTCTATTCCAAACTTGGTGATGTTTTCTTTGGTCACTTTAAAGATGGATTGCGCCATGGTCAATTTCTCTGTATCAACATTGATGGGACGAGGAGTATAGAGGAATGGGATGAAGGCCTTCTTCAAAGCCGAAAGAATTTGGATTCTGATGCAGAAACCGGGTAGACTGTCTATCGTATCTGTAAAAATATACGATCCTTCGTACATTCTTGGTGTACTAGAGAAACAAATGGCAGAAATATATCAAGCAGGGGCGGGCGGATGCCTATTACGAAGAGTTTTCTTCAATCAGCTTCAATGATCATAACAAAACTATGCTGTAGCAGTAGCAGCAGCTCAGAGTATTATATGAACATCCTCTAAGCATTTGGTTCTTTATTTGACTGGTGAAATCCAATTTGAAAATCTCCAATTCTAACAGATCTTGTATATTATGTAAATAGTAATTTAAAGTTATCTTTTTACATCTAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g007880.2.1 | SL2.50ch01:2041854..2055134 | 782 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g007880.2 | SL2.50ch01:2041549..2055134 | 13,586 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g007880.2.1.1 | SL2.50ch01:2054779..2055134 | 356 | - | 1 |
| exon | exon:Solyc01g007880.2.1.10 | SL2.50ch01:2046299..2046556 | 258 | - | 1 |
| exon | exon:Solyc01g007880.2.1.11 | SL2.50ch01:2046132..2046196 | 65 | - | 2 |
| exon | exon:Solyc01g007880.2.1.12 | SL2.50ch01:2045596..2045993 | 398 | - | n/a |
| exon | exon:Solyc01g007880.2.1.13 | SL2.50ch01:2045055..2045159 | 105 | - | n/a |
| exon | exon:Solyc01g007880.2.1.14 | SL2.50ch01:2044589..2044726 | 138 | - | n/a |
| exon | exon:Solyc01g007880.2.1.15 | SL2.50ch01:2042764..2042930 | 167 | - | 1 |
| exon | exon:Solyc01g007880.2.1.16 | SL2.50ch01:2041549..2041927 | 379 | - | n/a |
| exon | exon:Solyc01g007880.2.1.2 | SL2.50ch01:2052906..2052964 | 59 | - | 2 |
| exon | exon:Solyc01g007880.2.1.3 | SL2.50ch01:2051942..2052006 | 65 | - | n/a |
| exon | exon:Solyc01g007880.2.1.4 | SL2.50ch01:2050479..2050613 | 135 | - | n/a |
| exon | exon:Solyc01g007880.2.1.5 | SL2.50ch01:2049609..2049657 | 49 | - | 2 |
| exon | exon:Solyc01g007880.2.1.6 | SL2.50ch01:2049007..2049119 | 113 | - | n/a |
| exon | exon:Solyc01g007880.2.1.7 | SL2.50ch01:2048771..2048842 | 72 | - | n/a |
| exon | exon:Solyc01g007880.2.1.8 | SL2.50ch01:2048006..2048116 | 111 | - | n/a |
| exon | exon:Solyc01g007880.2.1.9 | SL2.50ch01:2047554..2047735 | 182 | - | 1 |
| intron | intron:Solyc01g007880.2.1.10 | SL2.50ch01:2046557..2047553 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.11 | SL2.50ch01:2046197..2046298 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.12 | SL2.50ch01:2045994..2046131 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.13 | SL2.50ch01:2045160..2045595 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.14 | SL2.50ch01:2044727..2045054 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.15 | SL2.50ch01:2042931..2044588 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.16 | SL2.50ch01:2041928..2042763 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.2 | SL2.50ch01:2052965..2054778 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.3 | SL2.50ch01:2052007..2052905 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.4 | SL2.50ch01:2050614..2051941 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.5 | SL2.50ch01:2049658..2050478 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.6 | SL2.50ch01:2049120..2049608 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.7 | SL2.50ch01:2048843..2049006 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.8 | SL2.50ch01:2048117..2048770 | n/a | - | n/a |
| intron | intron:Solyc01g007880.2.1.9 | SL2.50ch01:2047736..2048005 | n/a | - | n/a |
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