Solanum lycopersicum mRNA Solyc00g009110.2.1

mRNA details  
Name
Solyc00g009110.2.1
Type
mRNA
Length
2,262
Organism
Solanum lycopersicum
Description
Inositol-1 4 5-trisphosphate 5-Phosphatase-like protein (AHRD V1 *-*- Q9M1W5_ARATH); contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase
Location(s)
SL2.50ch00:8818874..8827274
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0004437
Length
8401
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc00g009110.2.1 Inositol-1 4 5-trisphosphate 5-Phosphatase-like protein (AHRD V1 *-*- Q9M1W5_ARATH); contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase

ATGAGAGAGAGCTCAAGGCAACAGCATCAAACTCAGCTTTTTTGGCCGCGAGTGGTGATGCGTAAATGGCTCAATATTAGTGCTAAGGATTCCGATTACAGTGCTGACCCTGACTCTGATGTCGGCTCCGATTCCGGTTCCGATTCCGACCAAGAATTCTGTGACTGGCCGAGGCAGTCGGGGCTGAACGATGCAAAAGACGGGAAAGTTGGAATTGATGATGCTCTTCCAAAAATAAGAAGGCGAAAATCAGAAACATTTAGGGCACAGTATATTAACGCTAAAGAAATTAGAGTATGTGTCGGCACATGGAACGTTGCAGGAAGATTTCCTCCAGAAGATCTTGAACTTGATAGCTGGTTGGATGTTAATGAGCCTGCTGACATCTATGTGATTGGATTTCAGGAAGTTATACCTTTAAATGCTGGCAACATATTTGGTGCTGAAGATAACCGCCCAATTTCAGTTTGGGAGGACATCATTCGCGAAAGTCTGAATAAAGTCTCACCAGTGAATAAGTTTAAATCCTTTAGTGATCCTCCTTCTCCATCAAGGTTTAGGCCATCCGAAGATGCCCCTGATATAGAAGAAGAAATTGCTTTTGAATCTGACAGTGGCAGTGAGGAGGAAATTGTCCCAATAAATGAAGAGTGCAATGACTTTGTTGAAATCAAGGATGGATGTATCATGGAGGATCATAAGATTGTGAAAAATGATGTAGCTGTTTTGAACAATACTTGGGGTTTGGAGCCAATCAATGAGGAGTTTCAAAAGCAATTTCCTTCTTCAAAAAAGCTAGACAGGCTGAATTGCTTTAGACCAGACGAGGAGGAAGAAGAAACAGGAGAATCAAATTTACAGTTTGCCAAAAAATTGACAAAAACACTTAGTGGGACAGAAAGAATTGGTCTTTGCTGGCCAGAGAAACCATTGGATCTTCTGGGCCAACATGTTTCAGAAAGACCTGGTTCCTTCAAATCAATGAAATCATTGAAAGCTTCTAAATCTTTTAACACTTACAGTTCTTTTAAGTTGACTGTTAATGGTCAGAATAGAACACAATCAGATGCAAATCTGCTTGCAGGACTAGACCTTGAAGCTTTGATTAATAGGAAAAGGAAACCATCTTATGTGAGGATTGTGAGCAAGCAAATGGTTGGAGTTTTTCTTAGCGTATGGGTTCGTAGGGGCCTAAGAAAGCATATACAGAATTTGAATGTATCTACAGTCGGTGTTGGAGTAATGGGCTACATAGGTAACAAGGGATCAGTATCTGTGAGCATGTCAATATATCAGACTTTCTTTTGCTTTGTCTGTACTCACCTTACATCGGGTGAGAAGGAGACAGATGTAGTCAAAAGAAACACTGATGTCCATGAAATTCATCGAAGAACACATTTCAATGCATTTTCGTTAATCGGACTTCCTAAGAGCATCCATGATCATGAGCGAATAATCTGGCTGGGAGATCTTAACTATCGTATAAATTTGCCATATAATAGAACGCGGGAGCTGATAGCAAAAAAGGACTGGTGTAAGTTGATTGAATATGATCAGCTCAGCAAAGAGTTCAAGAAAGGTCGTGCATTTGATGGGTGGTCTGAAGGTACTTTAAACTTTCCGCCGACTTACAAGTATGAAGTAAACTCAGAAAAGTATTGTGGAGAGGATCCAAAGGCCGGGAGACGTAATCCAGCATGGTGTGATCGAATCCTATCATTCGGGAAGGGAATAAGGCTGTTGCGTTATGGAAGATCTGAACTTAAGTTTTCAGATCATCGACCTGTCTCTGCCACATATATGGTAGAGGTTGAGGTATTTAGCCCGAGGAAGTTGCAACGGGCCCTCACTTTTACTGATGCGGAAATTGCAAAGGAGGAAATTGTCACAAATATGGGATTAGAGAATGGAATGAGCCGATTCATATCAGACCAGGGTGAATCTTGTTGGATGCGGTAAACAGTTGAAGAGGCTGAAAGATGGAATTTCCAGGACTCGCGATTTTTCATGAGTAACGGTTCTGCATATATTGTTTTAATTTTTTATTCTTCACTCTTGATCAGGCAGGCTGTATATTGTGTTTAATTAGGTGATGCATGTTTACTGTATATTGTTTGTTGTTCAGACTTGTAAGTGAGTGAGCTCATTTTTGTAGTCTTCCTTCTTAGTCTGGGCTTTTTCCAGCATGAATTTATGAAGCAGTTGTACAGCAATGTCCCCAATATTGTTTAACAATACATATAATAGAATGAGTTTGTTAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc00g009110.2.1SL2.50ch00:8818873..8826971653+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc00g009110.2SL2.50ch00:8818874..88272748,401+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc00g009110.2.1.1SL2.50ch00:8818874..881890936+n/a
exonexon:Solyc00g009110.2.1.10SL2.50ch00:8825742..8825976235+1
exonexon:Solyc00g009110.2.1.11SL2.50ch00:8826948..8827274327+n/a
exonexon:Solyc00g009110.2.1.2SL2.50ch00:8819037..8819154118+n/a
exonexon:Solyc00g009110.2.1.3SL2.50ch00:8819365..881943066+2
exonexon:Solyc00g009110.2.1.4SL2.50ch00:8820110..882018273+2
exonexon:Solyc00g009110.2.1.5SL2.50ch00:8820289..8820393105+1
exonexon:Solyc00g009110.2.1.6SL2.50ch00:8820892..8821756865+1
exonexon:Solyc00g009110.2.1.7SL2.50ch00:8822933..8823117185+n/a
exonexon:Solyc00g009110.2.1.8SL2.50ch00:8824099..8824207109+1
exonexon:Solyc00g009110.2.1.9SL2.50ch00:8824833..8824975143+n/a
intronintron:Solyc00g009110.2.1.1SL2.50ch00:8818910..8819036n/a+n/a
intronintron:Solyc00g009110.2.1.10SL2.50ch00:8825977..8826947n/a+n/a
intronintron:Solyc00g009110.2.1.2SL2.50ch00:8819155..8819364n/a+n/a
intronintron:Solyc00g009110.2.1.3SL2.50ch00:8819431..8820109n/a+n/a
intronintron:Solyc00g009110.2.1.4SL2.50ch00:8820183..8820288n/a+n/a
intronintron:Solyc00g009110.2.1.5SL2.50ch00:8820394..8820891n/a+n/a
intronintron:Solyc00g009110.2.1.6SL2.50ch00:8821757..8822932n/a+n/a
intronintron:Solyc00g009110.2.1.7SL2.50ch00:8823118..8824098n/a+n/a
intronintron:Solyc00g009110.2.1.8SL2.50ch00:8824208..8824832n/a+n/a
intronintron:Solyc00g009110.2.1.9SL2.50ch00:8824976..8825741n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17661933%2Fdetails feature 17661933
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