Solanum lycopersicum mRNA Solyc00g009100.2.1

mRNA details  
Name
Solyc00g009100.2.1
Type
mRNA
Length
1,811
Organism
Solanum lycopersicum
Description
30S ribosomal protein S1-like (AHRD V1 ***- Q5ZC75_ORYSJ); contains Interpro domain(s) IPR003029 Ribosomal protein S1, RNA binding domain
Location(s)
SL2.50ch00:8793413..8800152
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003723
Length
6740
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc00g009100.2.1 30S ribosomal protein S1-like (AHRD V1 ***- Q5ZC75_ORYSJ); contains Interpro domain(s) IPR003029 Ribosomal protein S1, RNA binding domain

TAACGAAACAAGCGGGAGCAGACATGCCACTTCTTCTTCTTCCATGTAAATCTTTCTCTATTTTCAATCCAATTTTGCCCCTCAACACCTCTGTTATTTACAACACAGCTATCCAATTCTCAGGTTTTTCCCTTTCTCCAAAATACCCACTTCCTAGAACCCCAAAATCTTCCAAGAATTTGTCAATCCATTGGAATTATCAAATAAATTTGCCTACCCATGTCTTGTTTTGCTCTAAAAATGAAATCTTTGAAGAATTTAGGACTACCCAGTTGGCTGAATTGCCTGAAAGTGAAGAGCTTGAATTGCATAATAAGCCATATTTAAAGCAAATAGATAATGGGGTTGTCTCAGATGTAGAGGAGGACCAGAAAAAAGTTAGTAAAGATGAAGTTTTGGAGCCATTTTATAAGTTATTTAAGCCTATAGAGTCTAATGAAGAAGAAAGTGATATAGAACAGGAGGAAGAGGTTCATCCAGTTGTAGAAGAGAGTAAGAAGGTTAGTGTAGAGTATTACGAACCGAAACCGGGTGATTTGGTGGTAGGTGTTGTGGTTTCGGGGAATGAGAATAAGCTTGATGTGAGTATTGGTGCTGACCTATTGGGTACAATGTTAACTAAGGATGTTTTGCCTTTGTATGACAAAGAGATAGGCTATTTGCTGTGTGATTTAGAGAAGGATGCTGAGGAATTCTTGGTGAGAGGGAAAATGGGAATTCTGAGCTATGATGATGCAGTGAGTGGGGAATCAACGCCGGGGAAGCCCGTTGTGGAGCCTGGGACTGTTCTTTTTGCTGAGGTTCTTGGAAGAACTCTCAGTGGTCGACCACTGCTTTCAACAAGAAGGCTCTTTAGACGCATTGCTTGGCATCGAGTGAGGCAGATTAAACAACTAAATGAACCTATTGAGGTGAAGATAACAGAGTGGAATATTGGTGGTCTTCTTACAAGAATAGAGGGCTTACGGGCTTTTCTTCCAAAGGCTGAATTGATGAACAGAGTTAATAGCTACACCGAGCTGAAGGAGAATGTGGGGCGTCGAATTAATGTGCTTATTACCAGAATAAATGAAGAAACTAATGACTTGATACTTAGTGAGAAGGAAGCTTGGCAAATGTTAAATCTGCAAGAGGGGACTCTTGTGGAAGGAACAGTGAAAAGACTTTTTCCCTTTGGCGCACAGATAAGGCTTGGTGAAACAAACCGAAGTGGCTTGCTACACATCTCAAATGTCACCCAAGCCAAGGTTACTTCCATGAGTAACTTGTTAGCAGTTGATGAGAAGGTGAAAGTTATGGTTGTGAAGTCAATGTTTCCTGATAAAATATCTCTCAGTATAGCAAACCTTGAAAGCGAGCCAGGGTTATTTTTATCGGACAAGGAGAGAGTATTTTCTGAAGCAAAACAGATGGCGAAGAAGTTCAGACAGAACCTACCAACTGTTTCAGCAACAAAGAAACCGGAACCCCTTCCAACCGACAGGCTACCATTTGAAGATGAAGAAAATATGTATGCTAATTGGAAATGGTTCAAGTTTGATAGGGATAATGTAAACATGGAATAACCCTCATCACTAAAAATGTATCGAACTGTATATCCTTTCGGCACGTCTTTAGGTCATTAGATAGCATCCATGACAAAGTACCATTGTTCAAAATCCCAGTTATGTTCTTTACTGAACTGTGTAAAAACTAATAATTCACATTTTGTTACTCAACTTTCAATTTTGACACAATTTTTAAGTTTCACATCCCTTTTTGACATATCATGCTTTCATAAATGAACTCTGTTTATAAAGTTTGGGCATTCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc00g009100.2.1SL2.50ch00:8793658..8800129514-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc00g009100.2SL2.50ch00:8793413..88001526,740-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc00g009100.2.1.1SL2.50ch00:8799269..8800152884-n/a
exonexon:Solyc00g009100.2.1.2SL2.50ch00:8798015..879808975-n/a
exonexon:Solyc00g009100.2.1.3SL2.50ch00:8797862..879793372-n/a
exonexon:Solyc00g009100.2.1.4SL2.50ch00:8797303..879738381-n/a
exonexon:Solyc00g009100.2.1.5SL2.50ch00:8796974..879707198-1
exonexon:Solyc00g009100.2.1.6SL2.50ch00:8795731..8795856126-1
exonexon:Solyc00g009100.2.1.7SL2.50ch00:8793996..879404449-n/a
exonexon:Solyc00g009100.2.1.8SL2.50ch00:8793413..8793838426-n/a
intronintron:Solyc00g009100.2.1.2SL2.50ch00:8798090..8799268n/a-n/a
intronintron:Solyc00g009100.2.1.3SL2.50ch00:8797934..8798014n/a-n/a
intronintron:Solyc00g009100.2.1.4SL2.50ch00:8797384..8797861n/a-n/a
intronintron:Solyc00g009100.2.1.5SL2.50ch00:8797072..8797302n/a-n/a
intronintron:Solyc00g009100.2.1.6SL2.50ch00:8795857..8796973n/a-n/a
intronintron:Solyc00g009100.2.1.7SL2.50ch00:8794045..8795730n/a-n/a
intronintron:Solyc00g009100.2.1.8SL2.50ch00:8793839..8793995n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17661916%2Fdetails feature 17661916
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