Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585731 in the current build, Tomato 200607 #2

Unigene SGN-U321476

Unigene Basic Information

Unigene ID:	SGN-U321476
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321476
mRNA sequence:	Length: 1425 bp

>SGN-U321476 Tomato 200607 #1 (8 members)
TGGACTTTGAAAGGAGTATAATTTACTACTCCATTACTTAAATCCACCGCTAAAACCTCCTCTTCCTACATTGGGGCTCTACTGTCTGAA
TCTCCCGCAGATATCGCCTCAAAATGCAAGATCCGTCCAATCCAAACTCCAAGCAGCTCAATCAGACGCCACCATTTTCCGCTACATTCA
GGCCATCGCACCACCGCAGAGCTCACTCCGAGGTGAACTTCCGGCTGCCTGAGGATCTAGATCTGGTATCTGACCCATTCGATGCGTCTG
CCGGAAGTTTTGAGGAGATCGGATCCGAGGATGATTTCTTCTCCACTTACATGGACATTGAAAAACTAGGCTCTGGATCCAACCCTACAG
ATGTTCCAGGGTTCAACAATGCCGGCGCTGGAAGTAGTGGACTGGTAGCTGACTGTGGTGATGGAGAAAGGAATTTCACCAGGCCTCGAC
ACAGGCATAGCAATTCAGTGGATAGTTCCAGCTTGTTATTAAGTGAGAGTATTGAAGCTAAGAAAGCTATGGCTCCTGATAAGCTTGCTG
AACTTTGGACCATTGATCCAAAACGCGCCAAAAGGATTTTGGCAAATCGGCAGTCTGCTTCTCGTTCGAAAGAGAGAAAGGCCCGTTACA
TTACTGAACTTGAGAGAAAGGTTCAGACCCTTCAAACAGAAGCAACCACTCTTTCTGCTCAATTAACCCTTTTCCAGCGGGATACAACCC
AGTTTACTAATGAAAATACAGAGCTCAAGCTCCGTTTGCAAGCTATGGCACAACAAGCTCAGTTACGTGATGCTCTGAATGAAGCCCTGA
AGCAGGAAGTGGAAAGACTTAAAATGGCCACAGGGGAAATGTCATCATCAGATGCATACAATTTGGGGATGCAGCACATTCCGTATAACC
AATCAGCATTCTTTTCGCATCAGCCACAATCAGGGGCTAGCGAATCCCAGAACATACAGATGCAGCAATTTCATTCCCTCCAGGATAGCT
TGTTGACTCCTCATCGCCGTTTACTTGCAGGGCATGGGCAGGGTCTCCCTGACACAATGCAACAGGATCCCCTAGGTCGTTTTCAAGGTC
TGGATATTGGTGGCAGGGGTCTGCATCTTGTGAAAACTGAAACACCTTCAATTTCTGCCAGTGAGAGCAGCAGTACATTGTGATTGACTT
GTGCAATCGGCCTTATTTATTGGAATTGTTCATAGACTGACACGTGTTTAACATCCAAAAACATGATATTCAATTTTTTTTTTTTCCATT
TGACTTCAGACTTAGGTTTCAGTAGCGGTTCCAGATGTTGTGATGTGTTGTTATTTTTTAGTTTGGTCAAAGTCTGAATCATTTCTTGTG
ATTTATTGGTGTAACTTTAAAGGAAGGTTGTTACCACTGCGTATTAAATGGTGTCTTTGAGTCTTTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101428	Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	192
2	118722	Eukaryotic transcription factor DNA-binding Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	33
5	131610	Eukaryotic transcription factor DNA-binding Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	6

Preceding Unigenes (2)

Unigene	Build
SGN-U224068	Lycopersicon Combined #3
SGN-U227506	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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