Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U582540 and SGN-U582541 in the current build, Tomato 200607 #2

Unigene SGN-U318570

Unigene Basic Information

Unigene ID:	SGN-U318570
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318570
mRNA sequence:	Length: 1610 bp

>SGN-U318570 Tomato 200607 #1 (16 members)
CATCCTACAGTAATATGTAGAGCTTATGCCAAAGCTCTTGAAGATGCTGTTGCCGTGCTTGACAAAATTGCAATGACAGTTGATGTTGAA
GATCGTGAAACAATGTTGGGTTTGGTTAAGAGTTGCATCGGCACAAAATTTACTAGTCAATTTGGGGATTTAATTTCAGATTTAGCAATT
GATGCCACAAGAATGGTTGGTGTGGAACTTGGCCAAGGGTTACGCGAGGTGGACATCAAGAAGTACATCAAGATTGAGAAGGTGCCTGGT
GGGCAGTTGGAAGACTCTGTGGTGCTTAAAGGAGTAATGATGAACAAAGATGTAGTTGCCCCTGGCAAAATGAAGAGAAAGATTGTAAAC
CCTCGCATCATTCTACTTGATTGTCCCCTAGAGTACAAGAAAGGTGAGAACCAAACAAATGCAGAGCTCCTTAGAGAGGAGGATTGGACT
GTCCTCTTGAAAATGGAAGAAGAGTACATTGAGAACATGTGCGCACAGATACTTAAATTCAAGCCGGATGTGGTTATTACTGAAAAGGGA
CTCAGTGATCTGGCATGCCATTATCTGTGCAAGGCTGGTGTCAGTGCAATCAGAAGGCTAAGGAAGACAGACAATAACAGAATTGCTAAG
GCATGTGGGGCAGTTATTGTTAATAGACCTGATGAGTTGCAAGAATCTGATGTTGGTACTGGTGCCGGTCTGTTTGAAGTGAAAAAAATT
GGGGATGAGTTCTTTACTTTTATTGTTGATTGCAAGGATCCGAAAGCATGTACTATACTTTTAAGGGGTGCGAGCAAAGATCTACTGAAT
GAAGTAGAAAGAAATCTACAGGATGCCATGTCTGTCGCTAGAAACATCATCAAGTGTCCTAAGCTAGTTCCCGGTGGTGGTGCAACAGAG
TTAACTGTATCTGCCATGTTAAAGCAGAAAAGTTCATCCGTTGAAGGCATAGAAAAGTGGCCGTATGAAGCTGCTGCAATTGCTTTTGAA
GCTATACCACGAACTTTGGCTCAGAACTGTGGTGTAAATGTGATTCGTACTATGACCGCTCTTCAAGGAAAGCATGCAAATGGCGAGAAT
GCATGGATAGGCATTGATGGAAACACTGGTGAGATTACCGACATGAAAGAGCGGAAGATATGGGATTCCTATGCTGTAAAAGCACAGGCT
TTTAAAACTGCCATTGAAGCTGCTTGCCTACTTCTGAGAATTGATGACATTGTGAGTGGAATAAAGAAGAAGCAAGCCCCTGGAGCAGGA
CAAGGTCCATCAAAACCAAAAATAGACGAAGAAGGTGATGCAGACAATGACCAGCTAATTCCGGAATGAACATGATATACTATGCTGCAA
TGGAAATGCTTATGCATTTGATAACCACTTGGAAGTTTTCATCTACTTCAGTATAGTCTGCCCTTGACTGATTGCTTGAACTTTTTGTGC
TTGACATGTAACTTCTGCTGTTTTTGACTGCTGGCAGTTGTTGGTTGTATTTGAAATAGATTTTGTTTCAGTTTTTGGTTTTAAATTAAA
TTTGATGTTGCAAGTACAATGACTAATCAATGTAGGGGTATCATGTTTTTCAAGGATCCAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOS	suspension cultures	8026	8

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101419	Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267)	214
2	118577	GroEL-like chaperone ATPase - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267)	50
5	132889	Chaperonin Cpn60 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267) GroEL-like chaperone ATPase - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267) T-complex protein 1 gamma subunit Chaperonin TCP-1	5

Preceding Unigenes (1)

Unigene	Build
SGN-U217772	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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