Sol Genomics Network

Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U586247 in the current build, Tomato 200607 #2

Unigene SGN-U317439

Unigene Basic Information

Unigene ID:	SGN-U317439
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317439
mRNA sequence:	Length: 1722 bp

>SGN-U317439 Tomato 200607 #1 (20 members)
TGAAGAGTAGCAGAGGAGAAGAGAGCACATGGCCTCGATACCGCTGGGACCTCAGCACCATAATCCGCCGGAAAATCACCATCACCACCA
CCTTCAGCCGCCGCCGCAGCTCGTGCAGCAGCAGCAGCAACAGCCTGTGAATCGTGAACTAGGAGGAGGAGGAGGAGCTGCAGTAAGGAA
CGCCGGAGCACGACCGGAAATGGAATCCGAAAAGGAAATGTCAGCTGCTGTTGTTGAGGGTAATGGTGCCGTCACTGGTCACATAATTTC
CACCACCATTGGAGGCAAGAATGGAGAACCAAAAAGGACCATCAGTTATATGGCAGAGCGAGTTGTCGGTACAGGGTCCTTTGGGATAGT
GTTTCAGGCAAAATGCTTGGAAACTGGAGAGACTGTGGCCATAAAGAAGGTTTTACAGGACAAACGGTATAAAAATCGTGAACTACAACT
GATGCGCTTGATGGATCACCCAAATGTCATTACTCTAAAGCACTGCTTCTTTTCCACGACTAGTAGAGATGAGCTTTTTCTTAATTTGGT
CATGGATTATGTCCCTGAAAGTTTATACAAGGTTTTAAAGCACTATAGCAATTCAAATCAAAGGATGCCACTCATATATGTCAAACTTTA
CATGTATCAGATATTCAGAGGGCTGGCTTACATTCATAATGTTCCAAGGATTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTGA
TCCTCTGACCCATCAAGTCAAGCTGTGTGATTTTGGAAGTGCAAAAGTCCTGGTAAATGGTGAAGCAAATATTTCATACATTTGCTCTCG
CTACTACAGAGCTCCAGAACTCATATTTGGTGCCACAGAGTATACAACATCAATTGATATTTGGTCAGCAGGCTGTGTCCTTGCTGAGCT
TCTTCTGGGGCAGCCGCTCTTTCCTGGCGAAAATGCAGTAGATCAACTGGTGGAGATCATCAAGGTCCTTGGTACTCCTACTCGGGAAGA
AATTCGATGTATGAACCCAAACTACACAGATTTCAGATTCCCACAGATAAAAGCTCATCCTTGGCACAAGGTATTCCATAAAAGAATGCC
TCCTGAAGCAATTGATCTTGCCTCACGGCTTCTTCAATATTCACCAAGTCTTCGCTGTACTGCACTAGAAGCATGTGCACATTCGTTCTT
TGATGAGCTTCGTGAGCCCAATGCCCGTCTCCCTAATGGACGTCCATTTCCACCTCTTTTCAACTTTAAACAAGAGTTAACTGGAGCTTC
ACCTGATTTGGTCAACAAGCTGATCCCTGAGCATGTGTGGAGGCAACTTGGTTTGAATTTCCCATTTCCTGGTGCGACGTAATTGTACTA
ATGTAATATAGAGTTGGTGTATCAGAAAAAATATATAGGGAGTCCTTGTGGATTAATGTAACCATGCATTTTGGCGTAACCAGTGGCTAT
GCACGCATGTAAAAGTTGTATGCATATAGCCGCTGTTTGGCTTACAAGAAGTGATCCTGTCTCTACTTGTGTCCTCTTTTAGCTAATAGC
AGACCTGTTGCCTCTTTTGTACATTGTTTTTGATAAGAAGAATTCAGATAGGAGTATAAAGTGATAAATATTGTAATGTCTAGTTAAGCA
GATTTCCTTGAGAGACCTTCTGGAGCACTAGGACTTGTAGCTTTGGGTTGTAGTTATATTTATATGCAAGTTGTTTTTAGCTCTAAAAAA
AAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSC	seed	2256	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	129072	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	47

Preceding Unigenes (2)

Unigene	Build
SGN-U216237	Lycopersicon Combined #3
SGN-U216238	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: