Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579781 in the current build, Tomato 200607 #2

Unigene SGN-U316752

Unigene Basic Information

Unigene ID:	SGN-U316752
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316752
mRNA sequence:	Length: 1184 bp

>SGN-U316752 Tomato 200607 #1 (23 members)
GGCGATTGGCGGCCAATCGGCCGAATTGATCTCCTTCTTGATCATCTTTTATCTTTTCTTCATTTCTTGGGTCACTCGATAAAATTAAGA
ATCTCGATTTATAGATTACTAAATAAAGGTTCTCAACATTGACAGCTGATTTATTGGTGTTATGGCTATGCCAGCTAGGAGATATGCTTT
TGGTAGGGCCGATGAAGCTACTCATCCTGATTCCATGAGAGCCACCTTGTCTGAGCTCTTATCCACCTTCATCTTCGTTTTCGCCGGTGA
AGGCTCTGTTCTTGCTATTGACAAGTTGTATCCAGATACGGGGTTAGGGTCATCAAGACTGATAGTGATAGCGTTGGCGCATGCGTTTTC
CTTCTTTGCAGCTGTAGCTTCTAGTCTGAATGTTTCTGGAGGACATATCAACCCAGCTGTTACCTTTGGTTCACTTGTGGGAGGCAGGAT
TTCTGTTGTTCGTGCTATCTATTATTGGGTTGCTCAGCTTTTTGGTTCTGTTTTAGCTTCTCTTTTGTTGAGGCTTGCTACTGATGGCTT
GCGGCCACGGGGATTTTCGGTTGCAGCAGGGGTGGGTAACTTGAATGCACTTGTGATGGAGATAGTGATGACATTTGGACTAATGTACAC
AGTATATGCAACTGCTGTTGATCCAAGGAGGGGAAGCTTGAGCACCATTGCCCCTCTTGCTATTGCATTTATTCTGGGGGCAAACACCCT
GGTGGGAGGGCCTTTTGAGGGTGCATCAATGAACCCGGCAAGGGCATTTGGACCTGCTTTAGTGGGTTGGAGGTGGAGGAACCATTGGAT
CTACTGGTTGGGCCCTTTCATCGGTGCAGCCCTGGCTGGACTTATCTACGAGTACGGGATCATACAGCATGAAACTGTTCCACGACCCAC
GACCCACCAGCCCTTGGCACCAGAAGATTACTAAGAGAGTCCTTCATTTGTGAATAAAAAAGGATTGTGCTTAAAAAACTTATGTGATGT
TTGTAGTCCAGTTTATGGTTGTTTTTTCATTCCATCTTCTGATGTTTTTTTCTGCGTTTAAATACTTCTGTATGTAGCTGCCTGCACATC
TCCTAAGTTTCAGAAATCAAGACGATAATCCCAGACCAGTAATAGCATGAATAAAGTCTACCTTTTATCCGTCTTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	14
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101425	Major intrinsic protein - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	199
2	118438	Major intrinsic protein - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	168
5	129060	Major intrinsic protein - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	50

Preceding Unigenes (1)

Unigene	Build
SGN-U238305	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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