Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U577307 in the current build, Tomato 200607 #2

Unigene SGN-U316327

Unigene Basic Information

Unigene ID:	SGN-U316327
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316327
mRNA sequence:	Length: 2314 bp

>SGN-U316327 Tomato 200607 #1 (21 members)
TTTTGTTGATATTTCTTTTGGATGTTTCTTCAACAAACCCTAGCATCAAGACCTCTTTAATCTTACTGCTCATTCATCTTTCTATTTGTT
TCGATCGCTGTTGAAAACTTGTTGAAGAATTCAAACGATCAATTTTGTATTGATGATGGTCACTTTGGGTTTTGTTCTACTTGCATTGTT
TGTAAAGAACGCTAATGCCTGTAGGTGTTGAAAAACCAGCAGCCAGCGGGAAGGGAAGAAGTTTCGTAAAGACCTGTGCTGCTAAGGCAA
AAGCAGAAGAGTTGAAGAGGAAATGGGGGATCAGAGCGGTGGGTTGAGTGCTAATAACAAAGGAACTGAGCAAGATGATGATGGTAAAAA
CTCTCCTATCCCTAAAAAGGTGAAAGTAGGAATGTCGCCAGTTTATCAGGTTGAAAGGAAGTTAGGTAAAGGTGGGTTTGGTCAGGTCTT
TTTGGGTCGTCGTCTTTCTGGTGGAAATGAATCTTCAAATGGTCAAGGGGCTGTTGAGGTTGCACTGAAATTTGAGCATATGAAAAGCAA
AGGCTGTAACTATGGTCCTCCACATGAGTGGCAAGTTTACAATACTCTTGGAGGCAGCCATGGAGTGCCTAGCGTGCATTATAAAGGGAG
GGTAGGAGACTATTACGTAATGGTTATGGACATGCTAGGGCCTAGCTTATGGGATGTATGGAATTCCTCTGGGCAGGCGATGTCTGCAGA
AATGGTAGCATGTATTGCAGTTGAGTCTCTGTCAATTTTAAGCATAATGCATGCACAAGGTTATGTGCATGGAGATGTAAAGCCAGAGAA
CTTTTTGCTTGGTCAGCCATCAACTCTGCAGGAGAAGAAGTTGTTCCTTGTCGACTTGGGACTAGCAACAAAGTGGAGAGAGAATGTGAA
AGGTCCGCATGTGGTATATGATCAGCGACCTGACATGTTTAGAGGGACTGTTCGGTATGCAAGTGCTCATGCACACTTGGGAAGGACTGC
CAGTAGAAGAGATGATCTGGAATCACTTGCATATACACTCATTTTTCTTCACAGAGGCAGGTTGCCATGGCAAGGATTTCAGGGAGATAA
CAAATCGTTTTTGGTCTGCAAAAAGAAGATGGCAACATCTCCAGAAATGCTTTGCTGTTTCTGTCCATCACCTCTGAGAGAATTTCTTGA
TATAGTAATAAACATGAAATTTGATGAAGAACCTAATTATTCGAAGTTAATCTCCTTATTTGGGAGCTTGCTTGGACCTGATCCTGCTAT
AAGGCCAATCAACACTGATGGTGCCCAAAAGATTCTTCAAGTTGGCCAAAAGCGGGGGAGATTAAATGTAGAGGAGGGGGAAGAGCAGCC
TAGAAAGAAGGTTCGCATCGGAGTTCCTGCATCACAGTGGATTTCGATTTACAATGCTAGGAAGCCCATGAAACAGAGGTACCATTATAA
TGTAACAGATACAAGACTAGCAGAGCATGTGGAGAAAGGGACTGAAGATGGATTATACATAAGTTGTGTGGCATCTTGTTCCGACTTCTG
GGCTATTATCATGGATGCTGGAACCAATTTCACTAGCCAAGTTTATGAGCTATCACAATCATTCTTGCACAAGGAGTGGGTTATGGAACA
GTGGGAGAAGAACTATTATATTAGTTCTCTTGCTGGTGCTACCAATGGAAGCTCTCTTGTTGTAATGTCAAAAGGCACACAGTTCAGTCA
GCAGTCTTATAAAGTAAGTGAGTCATTCCCATTCAAGTGGATAAGCAAGAAGTGGAAAGAAGGGTTCAATGTAACCTCCATGGCAACTGC
TGGAAGTAGGTGGGCGGTTGTTATGTCTCGTAATTCAGGTGTCAGTAACCAGGTAGTGGAGCTTGATTTTCTTTATCCAAGTGAAGGCAT
TCATAAACGATGGGACAATGGTTATCGTATTACAGCAACAGCTGCTACATTAGATCAAGCTGCTCTTATCCTGAGTGTGCCTCGACGAAG
GCCTGGCGATGAGACTCAGGAGACATTGAGAACATCTCAGTTTCCAAGCACACATGTTAAGGAAAAATGGGCAAAAAATCTCTATCTTTC
CTGTCTCTGCTATGGACGAACTGTATCTTGAGAGGATGGAAAATCTGATGTTGGACATTTTTCCTTCACCCCTTTTATTTTCTCATTGTC
AGTCAATTGTAAAAAGTGAGGAAATCTTAATTATGGTGGCACTTGCTTCTTTTAGCTTGTTTGGATAGTGGCAAACTTTCTCGTCTCTTG
TGTACATACAATTAACAGCACAAAATTACAAATCTATGAATCTTTTATAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118766	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	31
5	129244	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	29

Preceding Unigenes (1)

Unigene	Build
SGN-U215111	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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