Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563174 in the current build, Tomato 200607 #2

Unigene SGN-U315798

Unigene Basic Information

Unigene ID:	SGN-U315798
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315798
mRNA sequence:	Length: 1191 bp

>SGN-U315798 Tomato 200607 #1 (33 members)
TGGCGGCCAAATCGGCCGAATTGAGTGTGTGGATGAGGCATGGCGTTGATGGGAGAGAAATTTCGAGTGTGTGTAACTGGAGCAGGTGGA
TACGTGGCTTCATCGCTAGTGAAGCTTCTCCTTTCTAAAGACTACATAGTTCATGGCACCGTCAGAGATCCTTCTGATGACAAGTATGCT
CATTTGAATAACCTTGATAAAGCTGCTGACAACCTTAAGCTATTCAAGGCAGACTTGCTAGATCCCAACTCACTTGCTGGAGCCATCAAA
GGATGCGATGGGGTATTTCATGTTGCTAGTCCTGTTCCTTCCGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCTGTGAAC
GGCACACTTAATGTTCTCAAGGCATGCTATGAAGAAAACATCAAGAGAGTTGTGTTTGTGTCTTCTGTTGCTGCTTCTGCCTTGGACCCC
AACTGGCCAAAAGGCCAAGTGAAGGACGAGACTTGTTGGTCGGATGGTGAATTCTGCAAAGCAACTGATAACTGGTACTGTTTTTCTAAA
ACGGTGGCTGAGAAAGAAGCTTGGTCATATGCAAAGCAAAGTGGACTTGATTTGGTAACTGTGCTCCCAACACTTGTTATAGGGCCAATG
TTGCAGAAGACAAAAAACTCAAGTAGTTTGGTACTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTG
GTAGACGTACGTGATTTAGCTGATGCTTTACTGCTAGTCTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGCATGGCTCATGCAGTG
AAATCAGAAGATTTAGTTGCCATGCTAAAGAAACAATATCCCAACTACAACTATCCTAAACGTTTTACTGATGTGACGGAGGATGGTGGT
TTTAGTTCAGAAAAGCTGCAGAAGTTGGGTTGGCAATATAGGGCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAG
GGCTTTCTTGATTGAAAAAAAGACCCTTTTTTTCTTGTTGTCGTACTAAATAATTGCTCTGTATGTTTTTCAAGTTTTCACACTTGCAAA
CTAGTCTGGAATAAGGAGGTTACACTATGGTACCTTTTGAGTTCTATTTAGTTGTTTTGTTTTGCTCCCCAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	4
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
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Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101435	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	166
2	118460	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	116
5	129000	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	71

Preceding Unigenes (1)

Unigene	Build
SGN-U215676	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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