Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U581155 in the current build, Tomato 200607 #2

Unigene SGN-U315693

Unigene Basic Information

Unigene ID:	SGN-U315693
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315693
mRNA sequence:	Length: 1303 bp

>SGN-U315693 Tomato 200607 #1 (25 members)
GGGCGATTGGCGGCCAATCGGCCGAATTATCGAAAGCCTTTAATTTGTTTCCTCGATAGACATTTAAATTAAGTGATGGGTTTTCGTTTG
AGTCATTTGAGTCTTGCATTGAGTTTTGTGGCACTTGCACTTGCAGGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAAA
AACGGTTCACTCCTCAAAAATGTTTCTCCAGATTTCGATTCGTTGGAATCAGGCGTAGCCAGTATTTTAACCTTAAATAATAATAAGAAG
AGAAATTCAGACAAGTACTTGAGACAGCAACTAACTCCGGAGGCATGCGTTTTCTCAGCTGTACGAGCAGTTGTGGACAGTGCTATTGAT
GCAGAAACTCGCATGGGAGCTTCTCTCATTCGTCTCCACTTTCATGACTGCTTCGTTGATGGTTGTGATGGAGGTATTCTGCTAGATGAT
ATTAATGGAACATTTACAGGGGAACAAAACTCACCACCCAACGCCAACTCAGCCAGAGGTTATGAAGTAATAGCACAAGCTAAACAAAGT
GTCATAAACACATGCCCCAACGTATCTGTATCTTGTGCCGACATATTAGCTATTGCTGCTCGTGATTCTGTTGCTAAATTAGGAGGACAA
ACTTATAGCGTTGCATTAGGGAGAAGCGATGCTAGAACTGCCAACTTTAGTGGTGCTATAAATCAACTTCCAGCTCCATTCGACAACCTA
ACAGTCCAAATACAGAAATTCAGCGACAAAAATTTCACCCTCCGTGAAATGGTTGCACTAGCTGGTGCACACACGGTAGGTTTCGCCAGG
TGTTCCACAGTTTGCACCAGCGGTAACGTTAATCCTGCCGCACAACTCCAATGCAACTGCTCCGCCACGCTAACTGATTCTGATTTGCAA
CAATTGGATACTACTCCTACTATGTTCGACAAAGTTTACTACGATAACTTAAACAGCAACCAAGGCATAATGTTTTCAGATCAAGTTTTG
ACCGGGGATGCTACAACTGCTGGTTTTGTAACGGATTATAGCAACGATGTGAACGTTTTCCTTGGAGATTTTGCTGCTGCCATGATCAAG
ATGGGAGACTTGCCCCCCTCCGCCGGCGCTCAATTGGAAATTCGTGATGTTTGTAGCAGGGTTAATCCCACTTCAGTGGCTTCTATGTGA
AAAATTCGGAAATTTTAATTAACTTATCTCGCGACTAGTTGCTTCATGTTTTCTTCAAAATAAAAGAATCACTGGCTCCAGAATGTGGTT
TGGTTTTGGTATTTGTTTTGTAATCCATCCTATTTTATATGAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	5
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101394	Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase	328
2	118419	Haem peroxidase Plant peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	263
5	128931	Haem peroxidase Plant peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	255

Preceding Unigenes (1)

Unigene	Build
SGN-U215392	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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