Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U581240 and SGN-U581327 in the current build, Tomato 200607 #2

Unigene SGN-U314898

Unigene Basic Information

Unigene ID:	SGN-U314898
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314898
mRNA sequence:	Length: 1962 bp

>SGN-U314898 Tomato 200607 #1 (44 members)
GCACGAGCCAAATTGTTGTTATCATAATTGTCTCTCAACCATTCAACTCTCTTTCTAATATCTCAATCTTTTTCTCCTCCATACTTTTAC
AGAATGGGAAGCTCTGGTGGTATTGACTATGGTTCTTACACTTATGAGAATCTTGAGAGGGAACCTTACTGGCCGTCTGAGAAGCTCCGT
ATTTCCATTACTGGGGCTGGAGGGTTTATCGCTTCTCACATTGCTCGCCGTTTGAAGAGCGAGGGCCACTACATAATTGCCTCTGATTGG
AAGAAGAATGAGCACATGACAGAGGATATGTTCTGTCATGAGTTTCATCTTGCGGATCTTAGGGTTATGGATAATTGCTTGAAGGTAACA
AAAGGTGTTGACCATGTCTTCAACCTTGCTGCTGATATGGGTGGCATGGGTTTCATTCAGTCCAACCACTCTGTTATCTTCTATAACAAC
ACTATGATCAGCTTCAATATGATGGAAGCTGCTAGGATTAACAGTGTCAAAAGGTTCTTCTATGCATCTAGCGCTTGCATATACCCTGAG
TTCAAACAACTTGAAACAAATGTCAGCCTGAAAGAAGCTGATGCATGGCCTGCAGAGCCTCAAGATGCATATGGTTTGGAGAAGCTTGCC
ACAGAAGAATTGTGCAAACATTACAACAAGGATTTTGGAATTGAATGTCGTATTGGAAGGTTCCATAACATCTATGGACCTTTTGGAACC
TGGAAAGGTGGAAGGGAAAAAGCTCCTGCCGCTTTTTGTAGAAAAGCACAAACTGCAACGGATAAGTTTGAAATGTGGGGAGATGGACTT
CAAACACGTTCATTCACCTTCATTGATGAGTGTGTTGAAGGGGTTCTTAGATTGACAAAATCCGACTTCCGTGAGCCAGTAAACATTGGA
AGTGATGAGATGGTCAGCATGAATGAGATGGCTGAGATGGTCCTCAGCTTTGAGGACAAGAAGCTTCCTGTCCAACACATTCCTGGCCCA
GAAGGCGTCCGTGGTCGCAACTCAGACAACACGCTGATTAAAGAGAAGCTTGGTTGGGCTCCAACAATGAGATTGAAGGATGGTCTGAGA
ATTACATACTTCTGGATCAAGGAGCAGATCGAGAAAGAGAAATCTCAAGGAGTTGATACTGCAACCTATGGATCTTCCAAGGTTGTGGGC
ACCCAAGCTCCAGTTGAGCTAGGTTCCCTCCGTGCTGCTGATGGCAAGGAATAAGTTGATTCCTTCTGTCATCATTTCAATTGGAAGCCA
ATCCATCTGCTATGACATTGCTGCATTATGTATTATGGCGTCGTAGAAGATGTGTTAGATTCTGGTAATTGTTGGCGTTTCTTGGTTTTA
GTTTGAACATGTCAATGTAATCTATTACCCCATGGTCTTGTGAAGGGGATAGTTTAATAGTTCATCTATATTTATCAGTCGTTCGAGAAG
ATCTCAATGTGAGAACTGAATAACTGCCAGTGGATCCTCTCTTGTTTTTTTTACCTAGTTCAGGATCTTGCTGTTGTGCTGTTGGTGATC
ATGTAATCAAAATTTTAACCTTGATAAGGTTTAAAGATATGTGAGATTTCATTGCATAAAAAAAAAAAAAAAATTGAAATTTTCTAAGGA
AAAAAAAAAAAAAAAAAAAACAATTCCCCGGGGGGGGGCCAGGACCCCTTTTCCCCCTATGGAGGAGCGTATAAAGCTNGAAGTTTTGCA
TTCGAGATTATGTTTCATGTAGTTTTTAATATTTGGTCTTTTTTGCTTATTTATGTCTGGTGTTTCTTCTAAACCTTGGGTACTTGCTGT
AACCAGTACGGCAGTACCTGCAGTTTTTCTTTATCATATGATCTTATTATGTGGGACAGCAAATGGTTAGCTGATTGAATTGAAAGTGTT
CCCATTAACAATCCCGCCTATTTGATCTTTTAAAAAAAAAAAAAAAAANAACTCGACCTGCAGCCCGGGGGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (21)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	8
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	4
Solanum lycopersicum	cTSB	seed	1880	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (44)

Alignment image suppressed for unigene with 44 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	120051	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	11
5	130337	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	11

Preceding Unigenes (2)

Unigene	Build
SGN-U212809	Lycopersicon Combined #3
SGN-U214427	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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