Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577872, SGN-U579416, and SGN-U593283 in the current build, Tomato 200607 #2

Unigene SGN-U314268

Unigene Basic Information

Unigene ID:	SGN-U314268
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314268
mRNA sequence:	Length: 1165 bp

>SGN-U314268 Tomato 200607 #1 (32 members)
CGGCCAAATCGGCCGAATTGATAATATCAAAAAATAAAAATTGAAAAAATTTGTTTGTGAAAATTAATGGCAAACTCCATGCGTTTATTT
GCTACTATGTTACTTCTAGCAATGCTTGTCATGGCTACTGGACCAATGAGAATTGTTGAGGCAAGAACTTGTGAGTCTCAGAGTCATCGT
TTCAAAGGACCATGTGTGAGTGAGAAGAATTGTGCCTCGGTATGTGAGACCGAAGGATTTTCCGGTGGTGATTGTCGTGGATTCCGTCGC
CGTTGCTTTTGCACTAGGCCATGCTAAATTAAGAGTATTTTATATTCACCATATGTATCGGAAATACTCATGAATGAATAAAAGACACTA
TAATTGTTCAAAGATGTATAGTGCTAGTTTTGTTTGTAAAAACTAGTCATGGTCTTTGAATTATATGCAATTATGGTGCACTAGACTTAT
AATTCATGTGGTGTGTTTCTTGTTTTATGCAACATTATGAATAAAAATTTTCTTTATGGCACTAAAAAAAAAAAAAAAAAAAACCTCGTG
CAAAAATAAAATAAAATAAAATAAAATAAAAATGAAGCATTTTCCTACTGTTGCTGTCCTACTCTTCGTAGTGCTTCTTCTCTCAACAAA
TGAAGAAATAGGAGGTGGAATTAGAAAGACGGAGGCAAAACTCTGTCAATATCACAGCGAAACGTTCCATGGGGTGTGTGTGACCGGTAA
CAATTGCAACCGACACTGTCAGCGAGAAAACTTTGAGGGTGGCCGCTGCCACGGCTTTCGCCATTATCGTTGCGTCTGCTATAGAACTTG
TTAATTTCTTTTTATTATTTCGAATGCGTTATAAATAATAATAAATATTGCTTGTAATGTAATGTTATGATGCTCGATTTTCTTAGTTCC
CGTTCTCGCTTTTCTTGATCTTCCAAGCTTGAAGCTCGCCTGCTTTATTCTATATGATGTAACTACTATATTATTAATAAATAAGTGATT
TGAACCCTTGGTTCAACACTACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
GGGGGGATTTTTTTCCGGGGCCCCCAAAAAGGGGGGGGAAAAAAGGGGAAAAAGTTTTTCCGGGGGAAAATTTTTCCCCAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AJ133601	gamma-thionin	gamma-thionin

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	19
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	5
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (32)

Alignment image suppressed for unigene with 32 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 1 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101607	Ribosomal protein S15 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) S15/NS1 RNA-binding Ribosomal S13S15 N-terminal - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	61
2	124077		4
5	134323		4

Preceding Unigenes (1)

Unigene	Build
SGN-U214589	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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