Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566267 in the current build, Tomato 200607 #2

Unigene SGN-U314214

Unigene Basic Information

Unigene ID:	SGN-U314214
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314214
mRNA sequence:	Length: 1371 bp

>SGN-U314214 Tomato 200607 #1 (49 members)
TTCCTTCCTCTTCTTCTCCTTTTCCCATTTGCTTACTTTGTTTTTGAGTTTTTCTCCTTCTGTTGTTCTGGTTCTTGTTTTTCTCCTCTT
TTTTAGCCCTTTTGATTTCTGGGTTCCTTGTCTTTGTGGCTAAAATCCATCAAAGATCCAATCTTTTTTCACAAATTCTGTTCCTTTTAA
CCTCTGATTTCTGGGTTTTTGCTGAAACCCATCATAGATCCAACCTTTTTCTGTTCTGAGTTGAAACCCATCAAAGATCTAACCTTTTCT
CTTCTGGGTTTTTCAATCTTTGTGGCTAAAAGATCCAATTTTTTTCTCCATTTTTCCTGCTCTGTTTTCTGGGTTTTTACTCTTTTCTTG
CTGAAACCCATTAAAGATCTGTGAAAAAAAGAAGCAAAAATTAATGCTAATTAGAAATATTTATTGATGTACCAGATTCATGTCTCCAGT
TCTTAGTGAAATCCTTCGTTCTGGTTATATAATCAGTTCATCACTTAGACGCAGAACTCATCTTGTTCAATCTTTCTCTGTTTCTTTCCT
CTACTGGTTTTACACTTTCTCAGAATATTAAAAAAATAATAATCTTCATCTATAATTTTGCTTAGCATACCTTAAGAAACTTTAAAATTA
GTACTTCTCCCATCATCTGTACATAAAAAAAATGGCTACTTCTAGTGGTAATTCATCTCAGATTCCAAACAATTCAGCTTCTGATGAAGT
TTTCATGGTGGTTGATGAAAGGAAAAGAAAGAGAATGCAATCGAATCGCGAATCAGCAAGAAGATCAAGAATGAGAAAACAGAAACATTT
GGATGATTTGATGTGTCAAGTTACACAATTGAAGAAAGAAAACAGCAACATTCTGAACAGCATCACCATGACAACACAACAATATGGTAA
TGTTGAAGCAGAGAACTCTGTTTTAAGAGCACAAATGATGGAATTAACTCAAAGGTTGCAATCTCTTAATGAAATCCTCACTTACATCAA
TAATTCAAATAATAATAATAATTATTATCAAGAGGATTTTCAGATGAATCCATGGAATTTGATGTATGTTAATCAGCCAATTATGGCTTC
TTCTGATATGTTATATCAGTATTAGTGTTTAATTAAGGCTTGGTATTGGGTTATTTTATTATTAATAGTAAGATTTGAGTATTAGAATGA
GTTTAATGTGAAATTTGAGCAGTCAAAAGAGGATTAGTTGACTGTTATTTGGGCAATGCAAAAAAAAAAATGGGATCATGTGATGATGAT
ATATTGGAATGAATGGTTGTGATTGCATTATGTTTTTTCTATTTATTATATATTTTTAATAAATGCAAGTTGTTTTTATTGTACTACAAA
AAAAAAAAAAAAAAAACTCGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	8
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	9
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (49)

Alignment image suppressed for unigene with 49 aligned sequences.
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Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101428	Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	192
2	119122	Eukaryotic transcription factor DNA-binding Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	20
5	130015	Eukaryotic transcription factor DNA-binding Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	13

Preceding Unigenes (1)

Unigene	Build
SGN-U213967	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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