Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U564503 and SGN-U586986 in the current build, Tomato 200607 #2

Unigene SGN-U314195

Unigene Basic Information

Unigene ID:	SGN-U314195
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314195
mRNA sequence:	Length: 2154 bp

>SGN-U314195 Tomato 200607 #1 (33 members)
CGGCCGAATTGACAAAGCAACAAATACTAAATCTTCTTAAAGTTGGTCCCTTTTTTCTTCGTTGAAAATGATTAATTGAAGTGGGGTCTG
TGATTAATCAAGTTCCTGTATGAGTGATTGACCTTCTTGGGTATTGAAAAATTTAGTCTTTTCTGTAATCTTGCTTTCTAGATTTGGGGT
TTTGCAGTTTGCACCGCTAATTTAGTGAGGTGTTCAACTTAGAGAGAGAAAGAAAAGTAGTGGAGAGAGAAAGTTATGGCAGCAAAGTCT
GATGAACCAGCGCCACATCCACCAAAAGATCAGCTTCCTAATGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCAATCCTT
CTTGGATTTCAGCATTATCTGGTTATGCTCGGTACCGCAGTTATCATTACTACAGCTCTCGTTCCCCAGATGGGAGGAGGAAATGAGGAG
AAAGCGAAAGTTATTCAGACAGTGCTATTTGTTGCTGGGCTGAACACCTTGTTGCAATCTTACTTCGGAACTAGACTACCAGCTGTGATC
GGAGCGTCTTATACCTTTGTTGCACCTACAATTTCGATTATCCTTTCGGGGCGATGGAGTGACCCAGACCCTGAGTCGCGATTTAAGAAG
ATAATGAGGGCCACCCAGGGTGCACTTATTGTTGCTTCGACGATTCAGATTGTCTTAGGTTTCAGTGGTCTCTGGCGCAATGTTGTGAGG
TTTCTGAGCCCACTTTCAGCTGTTCCTTTAGTTGCTCTTGTCGGCTTTGGGCTCTATGAGTTTGGTTTTCCAGGGGTTGCCAAATGTGTT
GAAATTGGGTTGCCAGAGCTGGTCCTTTTGGTCATTTTCTCTCAATATTTGGCTCATCTGATACGCCCGGGGAAGCATATATTTGATCGT
TTTGCTGTTCTTTTCACCGTTGCAATTGTATGGATTTACGCCCACTTACTTACAGTGGGTGGGGCTTACAATGGAGCTGCACCAATTACC
CAAGCAAGCTGCAGAACTGATCGTGCTGGACTCATTGATGGTGCCCCATGGATTAGAGTTCCATACCCCTTTCAATGGGGTGCACCTTCA
TTTGATGCTGGTGAAGCATTTGCTATGATGATGGCTGCATTTGTTGCTCTTGTTGAGTCCACTGGTGCCTTTATTGCAACTACGAGATAT
GCAAGTGCTACTCCATTGCCACCATCTGTACTCAGCAGAGGTGTAGGCTGGCAGGGAATTGGCATTTTGCTGTCTGGCTTGTTTGGCACT
GGGAATGGATCTTCTGTATCTGTTGAAAATGTGGGGCTTTTAGCACTGACGCGTGTTGGTAGCAGAAGAGTAGTTCAGATAGCTGCTGGA
TTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTCTTTGCGTCAGTACCAACATCGATTGTAGGTGCTTTGTATTGCATTTTA
TTCGCTTATGTGGGCGTAGGTGGCTTAAGCTTCCTTCAGTTTTGCAATCTGAACAGTTTCCGTAGCAAGTTCATACTAGGCTTCTCCATC
TTTCTGGGTTTGTCAATTCCGCAGTACTTCAATGAACACACAGTTATTGAGGGTTATGGACCTGTTCACACGAGTGGACGATGGTTCAAC
GATATGGTTAACGTGCCATTCTCATCGGAAGCTTTTGTTGCGGGTATCCTGGCTTATTTCTTGGACAACACAATGCACAAAAGGGATGGT
CAGGTAAGGAAAGACAGAGGCAAGCCATGGTGGGACAAGTTCAAGTCTTTCAAGACGGACACGAGAAGTGAGGAATTCTATTCCCTCCCA
TTCAATCTCAACAAGTATTTCCCATCCGTGTGATCGCCCCGTCCTTTATCATGGAGATAGAAGGGTCATATACTCACATGCCATATCATC
ACTAGCCCTTCAAGAGCTGTGTATTGGTGCGCATTAATGCAGTGCCACCAATTTGCTTTTATATTTACTGGCTACTTCCCAAAGGTATAA
TTAATTAGTCTTGACATTTGTTAATTGTTGTCTTTCTTGTAAATCCAAGGTTATATGTACTATGAATAGTAATAGAATAAGCTTTGCTTC
TTTCAAAAAAAAAGGTGATTTCAGTAGCAATAAGCCTGTTCGATATGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (21)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSD	seed	1504	4
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101534	Xanthine/uracil/vitamin C permease - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	83
2	118626	Xanthine/uracil/vitamin C permease - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	42
5	129100	Xanthine/uracil/vitamin C permease - Molecular Function: transporter activity (GO:0005215) - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	41

Preceding Unigenes (1)

Unigene	Build
SGN-U214431	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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