Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U574969 in the current build, Tomato 200607 #2

Unigene SGN-U313481

Unigene Basic Information

Unigene ID:	SGN-U313481
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313481
mRNA sequence:	Length: 1208 bp

>SGN-U313481 Tomato 200607 #1 (22 members)
TTTGATTCTTTCTACTGATAATTTTTTTTTCAATTTCTGCATAATTTTGAGTATTCATCATCATGCTTCTGAAAGTGGCACCTGCGTTTG
CGTTATTGAACACCCATGAGGAAAATTTGAGTTCCGTGATATCATTTTCTTCACATGGATCTGCTTTGAAGAATTTTTCGGCAAAAAACG
GAAATGGATTGGTTGTATGTGCTTCAAAGGGTTCGAACAGTAAACCGTTGACGGGTGTTGTTTTCGAACCTTTTGAAGAGGTGAAGAAAG
AGCTTATGCTTGTACCTACTGTTCCTCAAGCTTCTCTTGCTAGACAGAAGTTTACTGATCAATCTGAAGCTGCTCTTAATGAACAGATCA
ATGTCGAATACAATGTTTCGTATGTTTACCATGCTATGTATGCCTATTTCGACAGAGACAATGTTGCTCTCAAGGGACTTGCCAAGTTTT
TCAAGGAATCAAGTGAAGAGGAAAGGGAACATGCTGAGAAGTTCATGGAGTATCAGAACAAGCGTGGTGGGAAAGTGAAGCTGCAGTCTA
TTTTAATGCCATTATCCGAATTTGATCATGCTGAGAAGGGGGATGCATTGTATGCAATGGAGCTTGCACTTTCTTTGGAGAAGTTGACAA
ATGAGAAGCTCTTAAACTTGCATGCTGTAGCCACACGAAACAATGATGTGCAGTTGGCTGATTTTGTAGAAAACGAGTACTTGCAAGAAC
AGGTGGAAGCAATCAAGAAGATCTCGGAATATGTAGCTCAGCTGAGAAGAGTGGACAAAGGTCATGGTGTCTGGCACTTTGATCAAATGC
TCCTGCACGAGGCGGAAGCTCTTGCATGATGGAGGAGATAGACTTTGAACTTTCTACGAGTAGTCTTCTTTTGGAGGATGTTGTCTGGGT
ATATTTTGGCATTAGCCTTTTCTATGAGATAGATATGTAAGGCGTTTTGGTGATGGAAAGTCCCAGTGCTGTATATATAGACCAAATAGA
TGTAGTAATTTGTGCTACTTATTAGTACCCTCCTGGTGTTCAAATCAGCTTTAATTTACCTCATGGTTTGCTAGTTGTAGCTTGGAATTG
AAGGTACCCCAGTGAAGTCAAATGTAAAGTGAAGTTGATAGTTTTGTTTTTAGTTGGATGTTGACTCATCTGGAGAAATAATAAATAATC
GGAATTTAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	9
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102006	Ferritin-like Ferritin-related Ferritin - Molecular Function: binding (GO:0005488) - Biological Process: iron ion transport (GO:0006826) - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199) Ferritin/ribonucleotide reductase-like Ferritin and Dps - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199)	25
2	119261	Ferritin-like Ferritin/ribonucleotide reductase-like Ferritin - Molecular Function: binding (GO:0005488) - Biological Process: iron ion transport (GO:0006826) - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199) Ferritin and Dps - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199) Ferritin-related	18
5	129604	Ferritin-like Ferritin/ribonucleotide reductase-like Ferritin - Molecular Function: binding (GO:0005488) - Biological Process: iron ion transport (GO:0006826) - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199) Ferritin and Dps - Biological Process: iron ion homeostasis (GO:0006879) - Molecular Function: ferric iron binding (GO:0008199) Ferritin-related	18

Preceding Unigenes (1)

Unigene	Build
SGN-U213608	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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