Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U564016 and SGN-U586644 in the current build, Tomato 200607 #2

Unigene SGN-U312308

Unigene Basic Information

Unigene ID:	SGN-U312308
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312308
mRNA sequence:	Length: 1635 bp

>SGN-U312308 Tomato 200607 #1 (19 members)
TCTTCCACACTTTGATCCCATTCGTTCAATTTCTCGCGAAAACAGAAAGGCAAAAATGCGTGAGATTTTGCACATTCAGGGAGGCCAATG
TGGGAACCAGATCGGAGCTAAGTTCTGGGAGGTTGTGTGTGCCGAGCACGGCATTGATTCCACCGGAAGGTACAAAGGGGAGAGTGACCT
TCAATTGGAGCGCGTCAATGTCTACTACAACGAGGCAAGTTGTGGAAGGTTCGTTCCACGCGCCGTCCTCATGGACTTGGAGCCGGGAAC
CATGGATAGCGTTAGATCAGGTCCTTATGGTCAGATATTCCGGCCGGATAACTTCGTCTTTGGTCAGTCTGGTGCTGGTAATAACTGGGC
CAAAGGACACTATACTGAAGGAGCGGAACTTATCGACTCGGTTATGGATGTTGTAAGGAAGGAGGCTGAGAACAGTGATTGCTTACAAGG
TTTTCAGGTTTGTCACTCTTTGGGAGGTGGAACTGGATCAGGAATGGGAACTCTCCTCATATCTAAGATCAGAGAAGAGTACCCAGACAG
AATGATGCTTACTTTCTCTGTGTTCCCTTCCCCAAAAGTTTCTGACACTGTTGTTGAGCCCTATAATGCTACTCTCTCTGTTCACCAGCT
TGTTGAGAATGCAGATGAGTGCATGGTTTTAGACAATGAAGCTCTTTATGACATTTGCTTCCGAACTCTCAAACTAACTACACCAAGCTT
TGGAGATCTTAATCATTTGATTTCTGCCACTATGAGTGGTGTGACTTGCTGTCTCCGGTTCCCTGGTCAGCTCAATTCTGATCTCCGCAA
GCTTGCTGTCAACCTCATCCCATTTCCTCGGCTGCATTTCTTCATGGTTGGATTTGCTCCTCTCACTTCTCGTGGGTCACAGCAATACAG
AGCCCTGACCGTTCCTGAGCTCACTCAACAGATGTGGGATTCAAAGAACATGATGTGTGCTGCTGATCCTCGTCATGGTCGTTATTTGAC
TGCTTCAGCCATGTTCCGGGGGAAAATGAGCACCAAGGAAGTTGATGAGCAAATGATTAATGTGCAGAACAAGAACTCTTCCTATTTTGT
GGAGTGGATTCCTAACAATGTGAAGTCTACTGTCTGTGACATCCCTCCAACTGGACTGAAGATGGCCTCAACTTTTATTGGCAATTCCAC
CTCAATTCAGGAGATGTTCCGTAGGGTCAGTGAGCAGTTTACAGCAATGTTTCGAAGAAAGGCTTTCTTGCACTGGTACACTGGAGAAGG
TATGGATGAGATGGAGTTTACAGAGGCTGAAAGCAACATGAACGATCTAGTTTCTGAGTACCAACAATATCAAGATGCAACAGCTGAGGA
GGAAGGTTATGACTACGAAGATGAAGAAGGTCAAGAAGCTTAAGTAATTCATCTGGTGAGAATTTTGTCGTCCCACTGTTTATTCTTTTA
AATGTTGTTTTAGGGTTTGGATATTTGTTTTGCGTGTGAGATAGTCGTGGGACAGTTTGCACAAGCCCATGTAGTTATACTTGGTGTTGA
ATTCTATTAGTACCAATATTTTGTGACAAGGGAATTGTGGCTCGCTTCAAANAACAATTATCTGAATGTGTTGTGAATATGAAATGTCAC
TTGTACAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (19)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101452	Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ GTPase Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	140
2	118444	Tubulin/FtsZ GTPase Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	138
5	128984	Tubulin/FtsZ GTPase Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	81

Preceding Unigenes (1)

Unigene	Build
SGN-U212620	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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