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This unigene is from an out-of-date build, Coffea canephora #1
It has been superseded by SGN-U617461 in the current build, Coffea canephora #3

Unigene SGN-U306337

Unigene Basic Information

Unigene ID:	SGN-U306337
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	126264
mRNA sequence:	Length: 76 bp

>SGN-U306337 Coffea canephora #1 (1 members)
AAAAACCTCCCTCGCAAGTGCAACCTGGAACCACAGCAGTGCCAAATCGGAGCTGTTTTCATCGAGTAATTAACTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs30w	Endosperm and perisperm 30 week after pollination	12592	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E652259
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 1 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|13183175\|gb\|AAK15088.1\|	101.7	1.6e-20	38.06	444 bp (584.2%)	2
Description:	gi\|13183175\|gb\|AAK15088.1\| 2S albumin [Sesamum indicum]
arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P110236 (190 Aa)

IKEKKWVINAQIEDNGKLHNPRNIFTGGPFDYXILPRPTXTTITTIVLEENEDPGNGGQLKNAKKKSNTTNDNSGTANXYLSQKSPSDLP
MYPLPGQKEEHLPPCCQTINNFDKHCLCEALIYLVRQQLTQGGGWQGDYMHHQVIQKAKNLPRKCNLEPQQCQIGAVFIXVINLCMMNKF
TWLPAFLAED

SignalP predicts non-secretion with a score of 0.029

IPR003612 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	911	AAI Napin	21
2	24880		7
5	62180		3

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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