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This unigene is from an out-of-date build, Coffea canephora #1
The current build is, Coffea canephora #3

Unigene SGN-U305470

Unigene Basic Information

Unigene ID:	SGN-U305470
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	128169
mRNA sequence:	Length: 49 bp

>SGN-U305470 Coffea canephora #1 (1 members)
GATTTTGGACACCGTGGCCCCCGCTAGCATTCTGGTCAAGGAAGTGGGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs46w	Endosperm and perisperm 46 week after pollination	10903	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E665601
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 1 | go: 1 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|1246823\|emb\|CAA61964.1\|	164.9	2.2e-41	59.86	423 bp (863.3%)	3
Description:	hypothetical protein [Phoenix dactylifera]
arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

GO:0008270 zinc ion binding

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P103030 (197 Aa)

ILDTVAPASILVKEVGGTSNPSYAVKDADHPAQNNIALXGSDDLDEPGDMKSRIAAVPDEAVNKCTTCSSIFHAFNRKHHCTNCGDIFCD
KCTQSTIALTADENAQPVRVCDRRSTKITQGLINTGDAPAIFAGSHSHGDLVKPLQEEMDYYPMPPPNVASDGFGTGRQRLHVLPAPSTY
WCTIPPLVLRPLKALFA

SignalP predicts non-secretion with a score of 0.077

IPR000306 Zn-finger, FYVE type

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	587	Ribosomal_L18p Ribosomal_L5euk	31
2	23875	Extensin_2 Znf_PHD Znf_LSD1 Znf_FYVE	10
5	71990		1

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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