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This unigene is from an out-of-date build, Coffea canephora #1
It has been superseded by SGN-U614687 in the current build, Coffea canephora #3

Unigene SGN-U301072

Unigene Basic Information

Unigene ID:	SGN-U301072
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	120939
mRNA sequence:	Length: 323 bp

>SGN-U301072 Coffea canephora #1 (6 members)
CATGGAAGAAGGAGAGTTCTCCGAAGCCCGAGAGGACTTGGCTGCTCTTGAGAAGGATTACGAGGAAGTTGGTGCTGAAGGTGTTGACGA
AGAGGAAGAACCCGAAGACTACTGATAGCTTGGCATGTTATGAACACGGGCTTTCTGGCTTTGCCCATCTCTTCTACTTGATTGAATCTG
TACCTTATCTTTGTGTATTGCTGTTTCTTTGCCTAGCTTGCAATTGTTGAATTGTGTCAAATGTTTCAATCTCAAAGTTTTTGTGCTAAT
AGCAAACAGGTGATGATCTATATATATTAGATTAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs18w	Edorsperm and perisperm 18 week after pollination	1972	2
Coffea canephora	cccs30w	Endosperm and perisperm 30 week after pollination	12592	4

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P109164 (43 Aa)

MEEGEFSEAREDLAALEKDYEEVGAEGVDEEEEPEDYXXLGML

SignalP predicts non-secretion with a score of 0.017

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	68	Tubulin_FtsZ Tubulin Tub_FtsZ_C	172
2	22017	Tubulin_FtsZ Tubulin Tub_FtsZ_C	143
5	56367	Alpha_tubulin Tubulin_FtsZ Tubulin AroFGH Tub_FtsZ_C	58

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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