Sol Genomics Network

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Unigene SGN-U291477

Unigene Basic Information

Unigene ID:	SGN-U291477
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	291477
mRNA sequence:	Length: 578 bp

>SGN-U291477 Solanum tuberosum #4 (1 members)
AAACCCTACCTGAAACTTACCCCCCTCCCCCCTAACCGAAAGCCGCCATGACTGACGTTGAGCTCTCTCGCTCAGAGAAGAAGAAAAAGA
AATCAAAGTCTGGCAAAAATGAGGACGAAACCCAAACACTATCCACCCCAATTGATGGTGATTTTCTCATCAAACCTCAAAGCTACACCC
CCACCATTGACACTTCAGAATGGCCGATTCTCTTGAAAAACTACGATCGTCTCAATGTCAGAACGGGTCACTACACTCCTCTCCCGTCTG
GGTATTCTCCATTGAAGCGTCCGCTTGCTGAGTATATAAGGTATGGTATTCTTAATCTTGATAAACCTGCTAATCCATCTTCACATGAAG
TTGTAGCTTGGATTAAGAGGATCCTTCGGGTCGAGAAAACGGGTCATAGTGGTACTTTGGATCCTAAAGTTACTGGGAATTTGATTGTTT
GTATTGATAGAGCGACCCGTTTGGTTAAGTCCCAACAGGGTGCGGGTAAGGAGTATGTGTGTGTAGCTAGGTTGCATTCTGATGTACCTG
ATGTTGCTAAGGTTGCTAGAGCACTTGAAGCTCTTACT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E455822
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2608	TruB__synth_N Cbf5 TruB	7
2	27234	TruB__synth_N Cbf5 Unchar_dom_2 TruB PUA	4
5	67704	TruB__synth_N Cbf5 Unchar_dom_2 TruB PUA	2
1.1	101387	NOSIC PWWP	377
2	123579	Pseudouridylate synthase TruB N-terminal - Molecular Function: pseudouridylate synthase activity (GO:0004730) - Biological Process: RNA processing (GO:0006396) DKCLD Uncharacterized domain 2 PUA - Molecular Function: RNA binding (GO:0003723) Putative rRNA pseudouridine synthase	4
5	137366	Pseudouridylate synthase TruB N-terminal - Molecular Function: pseudouridylate synthase activity (GO:0004730) - Biological Process: RNA processing (GO:0006396) DKCLD Uncharacterized domain 2 PUA - Molecular Function: RNA binding (GO:0003723) Putative rRNA pseudouridine synthase	2

Preceding Unigenes (1)

Unigene	Build
SGN-U261626	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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