Sol Genomics Network

Unigene SGN-U281202

Unigene Basic Information

Unigene ID:	SGN-U281202
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	281202
mRNA sequence:	Length: 1723 bp

>SGN-U281202 Solanum tuberosum #4 (8 members)
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGGCCTATTTTCCCCCAAAACAAAGCCCTAACTTTCTCTCTCTAAAAATTCTCCCCATTTCTCTCTTAATCTTCC
ATTTTTTTCGGAATTTTCCCTCAATTTCACTCCTTTTGATTATTGTTGGGTACGCTGTTCAAGTTAAAACAGTCCTTCTCGGAGTTATAC
TACAGCTGAAGTAGACCCAAATTTTCAGATTCACTGGTGTCTCTGTTTATCTTCCCGGATGGTTTGAGGAATTTTTTGAGGTAGTGGTGC
AGTTTAGCCATGGGGAGCAGTGATATTGACAAATCCTCTAAGGAGGCAAAGGAGTCAAAGGAGGCGAAGACTCCTAATTCACAGGAGCAA
GCTTCATCTACTGCTACTGGTACAGTAAATCCAGACTGGCCCGGATTTCAGGGATATTCACCGATGCCTCCACATGGGTTCATGGCTTCA
AGTCCTCAAGCACACCCTTACATGTGGGGAGTTCAGCATCTTATGCCACCCTATGGTACTCCACCACATCCTTATGTCGCAATGTATCCC
CATGGTGGAATATATGCTCATCCATCCATTCCTCCGGGATCATACCCCTTCAGCCCCTTTGCGATGCCATCTCCAAACGGCGTTGCTGAA
GTTGCAATTAACACCTCTGGCAATGCTGAATTAGATGGTAAATCATCTGAGGTAAAGGAGAAATTGCCCATTAAAAGATCTAAAGGAAGC
TTGGGTAGTTTGAATATGATTACAGGCAAGAACAACGAACTTGGTAAAACGTCTGGAGCATCTGCAAATGGAGTCTACTCTAAAAGTGCC
GAGAGTGGAAGCGAAGGCTCAAGCGAAGGAAGTGATGCAAATTCTCAAAATGAGTCACCAATGAAGTCAGCAGGCAGGCAAGATTCAGCT
GAAGAAGCATCTCAAAATGGCAATTCTGCTCATAGTTCTCAGAATGGAGGAACTAGTGCTCCTCAATCATTGGTCAACCAAACTATGGCA
ATCATGCCAATGTCAGCTGTGGGTGCTGGCGGTGTTCCTGGCCCCACAACCAACTTGAATATTGGTATGGACTACTGGAATGCCGCTGCT
TCACCGAATATTCCTGCAATCCATGGGAAGGTACCGTCTGCTTCAGTTGCTGGAGGAATAGTTAATGCTGGATCAAGGGATATTGTCCAA
TCACAAATGTGGATTCAGGATGAAAGGGAGCTCAAGAGGCAGAGAAGAAAGCAGTCCAACAGGGAATCTGCACGTAGGTCTAGGCTACGG
AAGCAGGCAGAGTGTGATGAACTAGCACAGCGTGCTGAAGTTCTAAAGGAAGAAAATACCTCTCTTAGAACATAACTGAGTCGTCTAAGG
AGTGAGCATGACCAACTTGCTTCTCAGAATGCTTCTCTTAAGGAGCGACTTGGTGAAGTTCCAGGCCGAGATGATCCCAGACCTAGTAGA
AATGACATACCTCTAAACAAAGATACCCAGCATTCATCACAAACAGAACCCAAACAGGGTGGTCAGTGAAGTTCTGGCTAGATTATCGTG
GATTGAAAAATAGGCTTAACCTAACAAACTTAGTAGCAACAGTCTTTAATTTGCATATTTATGTAGTTTAAAAATGTAAAAAATGTGAGG
TTTTTTAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	32	TF_bZIP	291
2	22405	TF_bZIP	31
5	58154	TF_bZIP	9
1.1	101428	Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	192
2	118899	G-box binding MFMR Eukaryotic transcription factor DNA-binding bZIP transcription factor bZIP_1 - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983) Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	26
5	131212	G-box binding MFMR Eukaryotic transcription factor DNA-binding bZIP transcription factor bZIP_1 - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983) Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U255429	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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