Sol Genomics Network

Unigene SGN-U278306

Unigene Basic Information

Unigene ID:	SGN-U278306
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	278306
mRNA sequence:	Length: 716 bp

>SGN-U278306 Solanum tuberosum #4 (4 members)
CAAGCTTTCAACTAAATCCCTGGCTAATCACCAGAAAGTGAACAAACATGGGGATAGAAAGTGAAGTACCGGAATCAGGAGGAGGAATCC
GGCGAAGAAATTGTGTGTGCACAAAAGACGATTTTCTGCCGGAGGAATCGTTCAAGAGCTGGGGCAATTACGTGAATGCGCTGAGGCAAA
CTCCGACGAGGTTAATCGAACGGGCGTTGACGCGATCGAATGATGAAGCAGAGCTGGAGGCGAAGTCACAGAGTCACCATGAAATGAAGA
AGACATTGACATGGTGGGACCTAATATGGTTCGGGATGGGAGCGGTGATTGGAGCAGGAATCTTCGTACTGACGGGGCTTGAAGCGAGCC
AGGATGCAGGCCCTGCTGTTGTACTGTCGTATGCAGTTTCCGGCGTCTCCGCCTTGCTCTCTGTCTTCTGCTACACTGAGTTTGCCGTTG
AGATCCCTGTTGCAGGTGGTTCATTTGCCTACTTGAGGGTGGAGCTTGGTGACTTTGTGGCCTTTATTGCTGCTGGAAACATCCTTCTTG
AATATGTGATTGGTGGTGCTGCAGTGGCTCGTTCATGGACCTCATACTTTGCAACTCTATTGAACTTCGAGTCTGACAAATTCCTCATCA
CGGCTCATGGTTTAGCCAAGGACTACAACCAACTCGACCCAATCGCTGGTGCGGTCTGCTTCATCATCTGCATCATTGCCATTCGT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	664	Yeast_AA_perm AA/rel_permease2 AA_permease Permease_region EtNH_permease AAc_permease AA/rel_permease1 AA_transporter Spore_permease Cat_AA_permease L_AA_transporter R/O_antiport	28
2	22503	Yeast_AA_perm AA/rel_permease2 AA_permease Permease_region EtNH_permease AAc_permease AA/rel_permease1 AA_transporter Spore_permease Cat_AA_permease L_AA_transporter R/O_antiport	27
5	57145	Yeast_AA_perm AA/rel_permease2 AA_permease Permease_region EtNH_permease AAc_permease AA/rel_permease1 AA_transporter Spore_permease Cat_AA_permease L_AA_transporter R/O_antiport	16
1.1	101699	Amino acid permease-associated region - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020) Amino acid/polyamine transporter I - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020)	45
2	118893	Amino acid/polyamine transporter I - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020) Amino acid permease-associated region - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	26
5	129984	Amino acid/polyamine transporter I - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020) Amino acid permease-associated region - Biological Process: transport (GO:0006810) - Cellular Component: membrane (GO:0016020)	13

Preceding Unigenes (1)

Unigene	Build
SGN-U250272	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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