Sol Genomics Network

Unigene SGN-U275272

Unigene Basic Information

Unigene ID:	SGN-U275272
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275272
mRNA sequence:	Length: 1298 bp

>SGN-U275272 Solanum tuberosum #4 (6 members)
CAAGAATCACTTTTTCTCTGTTTGTTCCCTTCTTTCTGCAAAAATAAAATAAAATAATTGCACCCATAAGGCCATAATACACAGATCTGT
CACTTACCCATGAATGTTGAGTCACATTTCTGAGTTGGGGTTTGGTTATTTTTTCTGAAAATATACAATGGGTGTTGAATATCATGAGGT
ATTTATAAGGAATTCAAGAGGTGTACAACTCTTCACTTGTAGATGGTTGCCCTTTTCTTCTCCAAAAGCCCTTGTTTTCCTTTGCCATGG
TTATGGCATGGAATGCAGTAGATTCATGAGAGGTGTTGGGACAAAGCTGGCAAATAATGGATACGCGGTGTTTGGAATAGATTATGAAGG
TCATGGACGGTCAGCGGGTGCGCGGTGTTACATCAAAAAGTTTGACAACATTGTCAACGACTGCAGTGAGTTTTTCAAGTCAGTTTGTGC
GCAGGAGGAGTATAGAGAGAAAACACGGTTTCTGTATGGGGAGTCGATGGGAGGGGCCGTGGCTCTTTTAACACACAAGAAGGATCCTTC
CTTTTGGCATGGTGCTCTTCTGGTTGCACCGATGTGTAAGATATCTGAGAAGGTGAAGCCTCATCCAATGGTTATAAGCTTGCTAACTAA
AGTGGAGGATGTAATACCAAGATGGAAAATAGTCCCGACAAAGGATGTCATTGATTCGGCCTTCAAGGAACCCGCTAAAAGGGAAGAGGT
ACGCGGGAACAAGTTAATTTATCAGGCAAAACCAAGACTGAAGACAGCTTTGGAAATGCTGAGAACCAGCATGCACCTTGAGGAAAGTTT
GCACGAGGTCACTCTACCATTTTTAGTGTTACATGGAGAAGCAGACATAGTAACTGATCCAGAAATAAGCAAGGCTTTATACGAGCAAGC
GAGTAGCAAGGACAAGACTATAAAACTCTATCCAGGAATGTGGCACGGTTTGACATATGGTGAGCCAGAAGAAAACATTGAAATCGTCTT
TTCAGATATCATCTCGTGGCTTGACAAGCGAAATGGAGAGAACATTGATGATGCTAGTTTAATCGAGAGATCAGTTTGTCTAGCTACATC
TACTCCTCCATATGAGATGCACACAATTTCTTCACCTATAACAATGAAAGAAACAAAACCACAGAGAACACGTCCCCAAGCTAATTATCT
GTGTGGATGGAAAGGACGTCGGATGCATCATCATTCATCTATGTAGAAACTTGATCGATAGATATGGCGTGTTGCATCTCCTTCATTTGT
TCATTTGCGTTACAGTGACATAAATGTTACTTCTATTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	234	A/b_hydrolase Ser_estrs	65
2	22108	A/b_hydrolase Ser_estrs	64
5	56497	A/b_hydrolase Ser_estrs	37
1.1	101622	Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824) Alpha/beta hydrolase - Biological Process: aromatic compound metabolism (GO:0006725) - Molecular Function: hydrolase activity (GO:0016787)	57
2	118558	Alpha/beta hydrolase - Biological Process: aromatic compound metabolism (GO:0006725) - Molecular Function: hydrolase activity (GO:0016787) Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	54
5	129279	Alpha/beta hydrolase - Biological Process: aromatic compound metabolism (GO:0006725) - Molecular Function: hydrolase activity (GO:0016787) Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	27

Preceding Unigenes (1)

Unigene	Build
SGN-U249035	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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