Sol Genomics Network

Unigene SGN-U274751

Unigene Basic Information

Unigene ID:	SGN-U274751
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	274751
mRNA sequence:	Length: 2252 bp

>SGN-U274751 Solanum tuberosum #4 (6 members)
TGTGATTGAGGACATAAGCTCCTATTTTATGTAGTGACTTTACTCAACTATCTTACTCTCCTTTAATTAGTGATATAAATGGTATTTTCT
TGTTCACGGTTTGCTTAGTTCATCATCAATTATATAAGAAACAGTCTCATATAAAATGAAGCAATTACTTGTGTGACATCACTTACGTGA
CTAATAGCGAGCTGGGTTTTGATTACCTGAGAGATAATCTTGCCACGGAAAAGTGTGGATGAGCTTGTCGTGAGAAATTTCAATTACTGT
GTGATTGACGAGGTTGACTCTATTCTGATTGATGAAGCCAGGACTCCCCTAATCATATCTGGACCTGCTGAAAAACCTAGTGATCAGTAT
TATAAAGCTGCTAAGGTAGCAGCTGCCTTTGAGCGAGATATTCATTATACGGTTGACGAGAAGCAAAAAAATGTCTTACTGACAGAGCAG
GGTTATGCAGATGCTGAGGAAATTCTGGATGTGAAAGACTTGTATGATCCGCGGCAACAATGGGCATCATATATTTTGAATGCAATAAAA
GCCAAAGAACTTTTTCTTAAAGATGTGAATTACATCATTCGCGGGAAGGAGGTTCTTATAGTAGATGAGTTCACTGGCCGAGTCATGCAG
GGGAGACGTTGGAGTGATGGACTTCACCAAGCAGTGGAAGCTAAGGAAGGCCTACCCATTCAAAATGAAACTGTAACCTTAGCATCAATT
AGCTACCAAAACTTCTTTCTCCAGTTCCCAAAGCTTTGTGGCATGACTGGCACTGCTGCAACAGAAAGTGCAGAATTTGAGAGCATTTAC
AAACTCAAAGTAACTATGGTGCCTACAAACAAGCCAATGATAAGAAAGGATGATTCTGATGTAGTCTTTCGCGCAACTTCTGGCAAATGG
AGAGCAGTTGTTGTAGAGATTTCTAGAATGCATAAGATAGGGAGACCTGTACTGGTTGGTACAACCAGTGTTGAGCAGAGTGATGCACTG
TCGGAGCAGTTGCGTGAAGCTGGGATCCCCCATGAGGTTCTGAATGCTAAACCAGAAAATGTGGAACGAGAAGCTGAGATTGTGACACAA
AGTGGGCGTCTTGGTGCAGTTACAATTGCAACTAACATGGCAGGTCGTGGTACAGATATAATTCTTGGTGGTAATGCAGAATTCATGGCA
AGACTGAAGTTGCGAGAAATATTAATGCCAAGAGTTGTCAGACCAGCTGAAGGAGTTTTCGTCTCTGTAAAGAAACCTCCTCCAAAGAGG
ACATGGAAGGTTAGTGAAAGTCTATTTCCATGCACACTATCCAAAGAAAAGACCAAGCTGGCTGAGGAAGCTGTAGAAGTTGCTGTCAAA
ATGTGGGGTCCGAGATCGTTGACAGAACTAGAAGCAGAGGAACGATTGTCTTATTCTTGTGAAAAGGGTCCTGTTCAAGATGAAGTAATT
GCAAAGCTACGCAGTGCTTTTCTAGAAATTGTCGGAGAATATAAAGTCTACACTGAGGAAGAGAAAAAGGAGGTTATTTCGTCTGGTGGG
CTCCATGTGATCGGGACTGAACGACATGAGTCGCGGCGAATTGACAATCAGCTGCGTGGTCGAAGTGGTAGACAAGGAGATCCTGGAAGT
TCCCGCTTCTTCCTTAGTCTTGAAGACAACATATTCCGTATATTTGGTGGGGATCGGATTCAGGGGATGATGAGAGCATTTAGAGTGGAG
GACTTACCAATTGAATCAAAGATGTTGACAAAAGCACTCGATGAAGCTCAACGGAAAGTAGAAAATTACTTTTTTGACATCAGGAAGCAA
TTATTTGAATACGATGAGGTATTGAATAGCCAAAGAGACCGGATATACACCGAGAGAAGAAGGGCCCTAGAAGCGGATGACCTCCAAGCT
CTCCTTATTGAATATGCTGAATTAACAATGAATGACATCTTGCAGGCAAATATTGGTTCTGATGCTCCAAAAGAAAGCTGGTATCTTGAG
AAGCTTATTTCAAAGCTGCAACAGTAATGATCTCGTGACGACTCTTTACTGTGTCTTTTTTTCATGAATTCATGCATTTTTCGGTATTTG
TGAATCAAAGGAAAGGTTTTGGTATTTAAAGAGTGCTGTAACCAGTTGCGAGCTTCATGTTCTCATAGTTCTTCTCACCTATCCTCCATT
TCACCCATATTCTGAATAGTACTGTTATATTACGATTCTACTCTGAGCTACTTGACCTTCACAGGTATTGCTATCTGCTGAATGATTTGA
CA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 6 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2127	SecA	9
2	25197	SecA	7
5	59197	SecA	7
1.1	102023	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	24
2	120574	SecA DEAD-like - Molecular Function: ATP binding (GO:0005524) - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA preprotein cross-linking region - Molecular Function: protein binding (GO:0005515) - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA Wing and Scaffold - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA protein - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein targeting (GO:0006605) - Biological Process: intracellular protein transport (GO:0006886)	8
5	131657	SecA DEAD-like - Molecular Function: ATP binding (GO:0005524) - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA preprotein cross-linking region - Molecular Function: protein binding (GO:0005515) - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA Wing and Scaffold - Cellular Component: membrane (GO:0016020) - Biological Process: protein import (GO:0017038) SecA protein - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein targeting (GO:0006605) - Biological Process: intracellular protein transport (GO:0006886)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U248094	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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