Sol Genomics Network

Unigene SGN-U274047

Unigene Basic Information

Unigene ID:	SGN-U274047
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	274047
mRNA sequence:	Length: 1322 bp

>SGN-U274047 Solanum tuberosum #4 (7 members)
AAGCCAGAGATTGTCGATCTAAGGGATATTAAAATTGTCAAGAAATTGGGAGGTACTGTTGATGATACCGAGTTGGTTAAGGGTTTAGTT
TTTGACAAGAAGGTGAGTCATGCCTCAGGTGGTCTCACACGAGTTGAGAAAGCTAAGATTGGGGTGATTCAGTTTCAGATTTCCCCTCCC
AAGACTGATATTGAGCAGAGCATTGTGGTTTCTGATTATACTCAAATGGACAGGATTTTGAAAGAAGAGAGGAACTACATTCTGGGCATG
ATTAAGAAGATCAAAGCAACTGGCTGTAATGTTTTGTTGATTCAGAAGAGTATTCTGAGGGACGCTGTGACGGAATTGTCTCTGCATTAT
TTGTCAAAGGCGAAGATTTTGGTGATTAAAGATGTTGAGAGGGATGAGATTGAGTTCATTACTAAGACCTTAAATTGTCTGCCTATTGCC
AATATTGATCATTTCCGAGCAGAGAAACTCGGCCATGCAGATTTGGTTGAAGAGATATCTCTTGGGGATGGTGGAAAGATTGTGAAGATC
ACAGGGATCCAGGACATGGGCAGGACCACTTCAGTGCTGGTTCGTGGGTCAAATCAGCTGGTCCTTGATGAGGCTGAGAGAAGTTTGCAT
GATGCATTGTGTGTGGTAAGATGTTTGGTGAACAAGAGGTTCTTGATTGCAGGAGGTGGGGCACCTGAGATTGAGCTCTCTAGGCAGTTG
GGTGCATGGGCAAAGGTTTTACAGGGGATGGAAGGGTATTGTGTGAGGTCATTTGCTGAAGCCCTCGAAGTCATTCCCTATACTTTGGCT
GAGAATGCTGGGTTGAACCCAATTGCAATTGTGACTGAGTTGAGGAACAGGCACGCTCAGGGCGAGATCAACACAGGGATCAATGTGAGG
AAGGGGCAGATCACCAACATATTGGAAGAGAATGTCGTGCAGCCATTGTTGGTGAGCACAAGTGCAATTACCTTGGCTACTGAATGCGTA
CGAATGATTTTGAAGATTGATGACATTGTTACTGTGAGGTAGAGTGATGTCATGTGAAATTGCAGAAAATTAGAAGTGTTTTGTCTTATC
TTTGGTTTTGACTTGTGTGCTTCAAGATTTATTGGTCCTCCGGTTCTTCTCTATTTCGGATTATATGCTGAATTTTCATTTTTCATTTTT
GCTTAGCTAATTTTTACTTGTGGGGTTTTCCGTTTTACTCGAATACTAAGTTTTGAGTGCACGACTCTTCTTCATTTTGATTGGTTGACA
TGGTGCAATATGTAACATGTGGATCACTATCAGTCTATCAATATTTTAGTCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	SWST	Stolon	5942	4

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	86	Cpn60/TCP-1	147
2	22101	Cpn60/TCP-1 Chaperonin_TCP-1	67
5	61084	Chaprnin_Cpn60 ATPsynt_OSCP Cpn60/TCP-1 Chaperonin_TCP-1	4
1.1	101419	Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267)	214
2	118577	GroEL-like chaperone ATPase - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267)	50
5	132641	Chaperonin Cpn60 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267) GroEL-like chaperone ATPase - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) Chaperonin Cpn60/TCP-1 - Molecular Function: protein binding (GO:0005515) - Molecular Function: ATP binding (GO:0005524) - Biological Process: cellular protein metabolism (GO:0044267) Chaperonin TCP-1 T-complex protein 1 delta subunit	5

Preceding Unigenes (1)

Unigene	Build
SGN-U250963	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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