Sol Genomics Network

Unigene SGN-U273930

Unigene Basic Information

Unigene ID:	SGN-U273930
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273930
mRNA sequence:	Length: 1882 bp

>SGN-U273930 Solanum tuberosum #4 (8 members)
GTAAAGAAGGCAGCATGGAGAATCTATCTCTTGAGGATGATGACAAGTTCACCTCCATTTCCAAATCCTACTCTAACTATCGCAGTGCCA
TGACTTGTCTTTCTGATTCTCACCATCCTCTTTCCCCGTCGATCATCGACGATTCCCTCGACCCCTTATTAGCATCTTCTATTCAACCAT
CCGTCATTGATGATCATGATATTGTTGTTGAACAATTTCAAAACCCTACAATAATCTCCCCTCCTTTAAACTTGGAGTATTTGAATATCA
CTGTTTCCGATCCACACAAGGAAATACAAGCATCCCCCTCAATTGTTCCCGGCACTAATACTTACGTTACCTATTTAATTACCACACAAA
CCAATTTACCTGATTATGGAGGATCCGATTTCACCGTTCGAAGGCGCTTTAAAGACATAGTTACTTTATCAGACAGATTGAGTGAAGGTT
ACAGAGGTTATTTTATTCCTCCCAGGCCAGATAAAAGTATCGTCGAGAGTCAAGTCATGCAGAAACAGGAGTTTGTTGAGCAAAGAAGAT
TGGCATTGGAGAAGTACTTGCACAAGCTTGCAGGACATCCACTCATTAAGAAGAGTGATGAATTGAGGGTCTTTTTGCAAGTCCATGGGA
AACTTCCCTTGCCAACTACCACTGATGTCGCATCGAGGGTATTGGATGGAGCAGTAAAGTTGCCAAAACAATTGTTTGGGGAATCAGGAA
ATGTCATTGGCCCGCAGGATGTTGTGCACCCTGCTAAAGGTGGTAGGGATTTGCTCAGGTTGTTCAAAGAATTGAAGCAATCTGTTGCCA
ATGATTGGGGTGCCTCCAAGTCATCTGTTGACGAGGAGGATAAGGTTTTCCTGGAAAATAAAGAAAGGTTGCACAATCTTGAGCTGCAAC
TTAGTAATGCGTCAAAGCAGGCTGAATCACTTGTTAAAGCTCAGCAAGATATGGGGGATACAATTGGAGAACTTGGGCTTACATTTATTA
AGTTGACGAAGTTTGAGAATGAACGAGCTACTGTGAATACTCAGAGAGAACGGGCTGCTGATATGAAAAATGTGGCTACTGCAGCTGTTA
AAGCCAGCAGATTGTATCGGGAGTTAAATTCACAGACAGTGAAGCATTTGGATATTCTACATGAACACCTGAGTCTAATGTTGGGTATAC
ACCATGCATTTTCAGACCGATCAAGTGCTTTATTGACAGTGCAGACTCTCATTTCAGAATTGTCTTCCTTAAATTCAAGAGCAGAGAAAC
TTGAAACAGCAACCTCTAAAATATTTGGAGGTGATAGATCAAGAGTTCGAAAGTTGGAAGAGTTAAAAGATTCCATTAGGGTCACTGAAG
ATGCCAAAAGCTGTGCCATCAGAGAATATGAGCGCATTAAGGAAAATAATCGAAGTGAGATAGATCGAATAAATAGAGAAAGGCATGTTG
ACTTTGTGAACATGTTGAAAGGATTCGTAACTAATCAGGTGGCTTATACGGAGAGAATTGGACAAGAGTGGTCGAAAGTTGCAGAGGAGA
CCAGTCGTTATTCAAGAGAGAGTTGACAAAATGTATGCTGTAAAATCAGTTAATTAGCTTTTTCTTCTTTCATTTTTGTGTTAATTGATT
GTACAGTGGGAAATTAATACAGTACAAGACACCTAAATTTTTGTAAATTTCCCACTCCCATGAGTTATTTTCACACTTTCTTGAAAAATT
ATTTTCTTGTTTCTAAATACAAGGTTCCTTCCATTCAAAGAATTGTATCAAGTGCCAGAACATAAGAAGTTAGGGTGTCAATGGTACGGT
TCGGTCGGTTATTTTTAAAAAATTATACCATTCTAATTTTTCAGTTGTTTTATAAAAAATAACTAAAATTTTATTCTAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1285	PX	15
2	24226	PX	9
5	58270	PX	9
1.1	102552	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	13
2	120818	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	8
5	131069	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U247490	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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