Sol Genomics Network

Unigene SGN-U273623

Unigene Basic Information

Unigene ID:	SGN-U273623
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273623
mRNA sequence:	Length: 961 bp

>SGN-U273623 Solanum tuberosum #4 (8 members)
GTTTTTTCGTGAAATCTTCTTCAAAGATTTTTTTGTGTAAAAAGTTCTTCTTCCTTTATCAGCAATGAGCTCTTCGTCATCCTTTTTCCT
CACCAACCCCTTTTCATCGGTTTCGGGTTCGACCCATCTCCGCCGTTCATTCAACAATGCAAGATTCGGCGGCGGCGGCGTTAGAATCGC
CGCTAGCCTTAACGTGGAAGTGCAGGCACCGGATTTGAGCAAAGAGGTGATGGATGAATCTAACAAGGTTTTTGTGGGTACATATGCTAG
GGCTCCATTGGTTTTGTCGAGTGGCAAAGGGTGTAAATTGTATGATATTGAAGGGCGAGAATATTTGGACTTGACCTCTGGTATTGCTGT
GAATGCACTTGGACATGGTGATCCTGATTGGATTAGGGCTGTTACTCAACAAGCTAATGTCTTAACTCATGTCAGCAATCTTTACTATAC
TCTACCTCAGCTGGAGCTAGCAAAACGCCTTGTTGCTAATTCTTTTGCAGACCGTGTTTTCTTGTCAAACTCTGGAACAGAAGCAAATGA
AGCTGCAATTAAATTTGCAAGGAAGTTTCAGAGATTTTCTCATCCCGATGAGAAGCAACCTCCTGTGGAGTTTATTGCCTTCTCCAATTG
CTTCCATGGAAGGACCATGGGTGCAGTTGCTTTGACAAGCAAAGAATATTACAGGTCACCTTTTGAACCTGTAATGCCAGGAGTTACTTT
CCTTGAGTATGGTAGTGTTCAAGCAGCAAAAGAACTAATTCAGAGTGGTAAAATAGCTGCTGTATTTGTCGAACCAATCCAAGGTGAAGG
GGGCATATATAGTGCAACACAAGAATTTTTACAAGCACTGAGGACTGCCTGTGATAGTGCAGGTTCTCTCCTTGTCTTTGATGAGGTTCA
ATGCGGCCTAGAAGAACTGGTCATCTTTGGGCACACGAAGCTTTATGGCATATACCCAGAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	236	ArgD BioA Dat Aminotrans_3 HemL	65
2	22598	ArgD GABAtrns_bact GABAtrns_euk BioA Dat Aminotrans_3 HemL	24
5	60350	ArgD GABAtrns_bact GABAtrns_euk BioA Dat HisP_aminotrans Aminotrans_3 HemL	5
1.1	101610	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170)	60
2	119081	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170)	21
5	132447	Aminotransferase class-III - Molecular Function: transaminase activity (GO:0008483) - Molecular Function: pyridoxal phosphate binding (GO:0030170) Acetylornithine and succinylornithine aminotransferase - Biological Process: arginine metabolism (GO:0006525) - Molecular Function: transaminase activity (GO:0008483)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U247198	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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