Sol Genomics Network

Unigene SGN-U272626

Unigene Basic Information

Unigene ID:	SGN-U272626
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272626
mRNA sequence:	Length: 1416 bp

>SGN-U272626 Solanum tuberosum #4 (10 members)
GTCGAGTGATTGTTTGGGTTTTACCCGAAATAGAGAAGCGAAAAGAGTGTGAAAATCGTTTGAGTCTAAGTTTTGCTCTCTCCTTTTCAA
GCTCGTTATCGTCCCAGGCGCTGCCCTGAAGAAAAGGTGCAAGTGAAGTCCAAGATGCAAACTGAAAGTGCTTTGTCAGTTATGGGGCCA
AGGCCAATGGAGTTGTCTGCTGTGCTTCCTAGCGGTCCCCAAGGACTTGGACCAAATGGAAAACCACGGACATCAAGCTTGGAGTCACCA
ATTATGTTGCTATCTGGACATCAAAGTGCAGTATATACTATGAAGTTCAATCCAGCAGGAACAATCATTGCATCTGGTTCACATGACAAA
GAAATCTTTCTTTGGAATGTACATGGTGATTGCAAGAATTTTATGGTCTTGAAAGGGCACAAAAATGCAGTTCTTGATGTTCAATGGACT
ACTGATGGATCAACAATAGTATCAGCTAGCCCCGATAAGACTGTTAGGGCATGGGATGTAGAAACAGGGAAACAAATAAAGAAAATGGCT
GAACATTCCTCATTTGTTAACTCATGCTGCCCAGCTCGTAGGGGCCCTCCTCTTATTGTCAGCGGATCTGATGATGGCACTGCTAAACTT
TGGGATATGCGCCAAAGAGGAGCCATACAAACATTTCCAGACAAATTTCAAATTACTGCCGTCAGTTTCTCTGATGCCTCCGATAAAATC
TGCACAGGTGGTATTGACAATGATGTGAAATTGTGGGCATTTACGAAGGTGTGAAGTAACTATGACTCTTCAAGGCCATCAAGATACTAT
AACTGGTATGCAGCTGAGTCCTGATGGGTCTTATCTTCTTACTAATGCCATGGATTGCACACTCCGCATATGGGACATGCGCCCTTATGC
GCCCCAAAATCGATGTGTTAAGATCTTGGTAGGCCACCAACACAATTTTGAAAAGAACTTGCTGAAATGTAGTTGGTCGCCTGATGGAAG
TAAGGTAACAGGTGGGAGTTCTGATCGCATGGTTTATGTTTGGGACACAACATCTAGGCGGATCCTGTATAAGCTCCCTGGACACACTGG
ATGTGTTAATGAATGTGTTTTTCATCCTAATGAACCAATTGTTGGATCTTGCAGTAGTGACAAACAGATGTATTTTGGTGAGATTTGATT
GGTATTACTACCTTGTCTACCCTTGAGCTAAATATTTAGGATGAGATTTGGGAAGTAGGTGAGGATTTATGAAGTTGTAATCAAAGTTTG
TGTCACACTATGGGCGAACATTTGAACTGAGATATCGTGATATGCTTGCTTCATTTGGAGTAGTTGATAGATTTTATTGGTGATTGGGTA
GTCACTTTATTTACTTTTTTGTTGTTGAATTCAGTATTTAAACTTTGGCCTGAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	6	WD40	833
2	22056	WD40	91
5	59464	WD40	6
1.1	101368	WD-40 repeat	806
2	118510	WD-40 repeat	72
5	133552	WD-40 repeat Nitrous oxide reductase N-terminal	4

Preceding Unigenes (2)

Unigene	Build
SGN-U248233	Solanum tuberosum #3
SGN-U252014	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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