Sol Genomics Network

Unigene SGN-U272290

Unigene Basic Information

Unigene ID:	SGN-U272290
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272290
mRNA sequence:	Length: 1567 bp

>SGN-U272290 Solanum tuberosum #4 (9 members)
CTGGAAATGTGGCTAAAATGTAGTACAAGTGCAACTGGTATGCGTTATCGACACATGTTGTTCACGTGCTTCGAGTTGCCATCGTGCAGG
CAGGCTTCGGTCTCACCGTCGACAACTTAGATCTCCCTTGCCGTAACAACTCTTCCTTCTTCCCGGCGAACTTCACTCTCTTCTCAATCT
CCTTCTCACCTCTCTGAGTTTCCATTACTGACATATAGCAGTAAAGATGATGGGATATGAGAATCAAGAGTCCCACCTTTATGCATCCAA
AGAGGAGATGGAATCTCTGGTACTCGACGACGATTCTCCCACAGGCACTGCTCATCCTTTCTCCGATCCACTTTCATCATCCTCATCTCT
TCCTTTCGCTGAAATCCCTACTGACCAAAGTCAAACCCCTAATTCTTCCTTTAATTCCATCCTCGAACCTCCTTCTTACGCTGAGGCTAT
TTTCAGATCCTTTGACGCTGATCACTCCTCTCCTCAACTCAACGGCGCTCATGATCACTCTATTGCTTCTCCTTCCTCACCTCCATCCTC
CGACGACTTTTTGACCATTACCGTTTCCGATCCACAGAAAGAGCAAGAGTTGTCCAATTCTCTCGTTCCTGGGGGGACTGCTTATGTTAC
CTACCTAATTACTACCAGGACGAATTTACCGGAATTTGATGGAACTGAATTTAGTGTGAGGAGGAGGTTTAGAGATGTGGTGACTTTGTC
CGACCGATTAGCTGAGTCGTATAGAGGTTTTTTCATTCCGGTAAGGCCGGATAAGAGTGTTGTTGAGAGTCAGGTGATGCAGAAACAGGA
ATTTCTGGAACAGAGGAGAGCAGCACTGGAGAAGTACCTGAGGAGATTAGCTGCGCATCCTGTGATAAGGAGGAGTGAGGAGCTAAGAAT
GTTTTTGGAGGCGAATGGGAAGCTGCCGCTGGTGAGGACAACAGATGTGGCATCCAGGATGTTGGATGGGGCAGTGCAGTTACCCAAGCA
GATCTTTGGTGAGACAGCAGGGGGAATGGTGGATGCCAATGAGGTGGCTCAGCCTGCCAAGGGAGGTAGGGACCTGTTGAGAATCTTTAG
GGAGTTGAAACAATCTGTTTCTAATGATTGGGGTGGTGTGAAGCCACCTGTAGTAGAGGAGGATAAGGAATTAGTGGAAAAGAAGCAGAA
GTTGCATGATTTTGAGCAGCAGCTCAGCAATGTGTCTCAGCAGGCCGAAGCACTTGTAAAAGCTCAGCAGGATATTGGAGAAACCATGGG
CCAAATGGGCCTAGCTTTTGTCAAGTTAACAAAGTTTGAGACAGAGCGAGCAGTTTATGATTCACAAAGAACAAGGGCTGCAGATATGAA
GAATGTGGCAACTGCTTCTGTTAAGGCAAGCAGACTATATAGGGAGCTAAATGCACAAACTGTCAAACATTTGGATAAGCTCCATGAATA
CCTTGGAGTGATGTTAGCTGTGAACAATGCATTTTCCGATANGGTCAGTGCTCTTTTGACAGTACAGACATTGTTGTCTGAGCTGTCATC
ACTNAATTCGAGGATCGATAAACTTGAAGCTGCTGCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1285	PX	15
2	24226	PX	9
5	58270	PX	9
1.1	102552	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	13
2	120818	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	8
5	131069	Phox-like - Molecular Function: protein binding (GO:0005515) - Biological Process: intracellular signaling cascade (GO:0007242) - Molecular Function: phosphoinositide binding (GO:0035091)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U246013	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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