Sol Genomics Network

Unigene SGN-U270719

Unigene Basic Information

Unigene ID:	SGN-U270719
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270719
mRNA sequence:	Length: 1600 bp

>SGN-U270719 Solanum tuberosum #4 (18 members)
AAAACAGTGACACCAGAGCTAACACCATCTCTCTCTCACATGCAAAACACACACAGAAAAGAGTAACAAGTGAACAACCACAACCATGGC
GGCCACCATTGTTAGGTCACCGAAGCTCTCCCTCTCCCTTCCTCCACCTGAATCAACCACCTCAAATCTACCATCTCTAAACCAGAGCTT
CTTCACTTCGTTACCTAAACGACGTCGTTGTATCTCGATCTACGCATGTACCGCTGGTGATCAAAGCAACAGTGCATTTGGAGGTGAAAT
TAAGAAAGGACAAGCGATTGAGCTTAACAAAGTTAATGATGAGAATCCTTATGAATTTAATGCTAAGGATTCACCTAATCCCTTGCCTAG
GCCATTAACTTCGGCTGATTTGAGCAATATGGCTTCTGAAGGTTCTCGTCTTCGGGTTGCTTATCAGGGTGTGCGTGGTGCTTATAGTGA
ATCAGCTGCAGAGAAAGCATACCCCAACTGTGAAGCAGTTCCGTGCGAACAATTTGATACTGCTTTTGACGCTGTTGAAAGGTGGCTTGT
TGATAGAGCAGTTTTACCAATAGAAAACTCTTTAGGGGGGAGTATTCACAGGAATTATGACCTTTTGCTGAGATATCGTTTACATATAGT
TGGAGAAGTCAAACTAGCAATTCGACACTGTTTGCTGGCTAACAATGGCGTCAAAATCGAAGACCTGAAAAGAGTTCTTAGCCATCCGCA
GGCTCTTGCTCAGTGTGAGAACACATTACGAAGTTGGGATTGGTCAGAGAAGCCGTAGATGATACTGCTGGTGCAGCCAAGTATATTGCT
TTCAGCAAACTCAAAGATGCAGGAGCAGTTGCAAGTTTAGCTGCATCTAGGATCTATGGTTTGAATGTGCTTGCACAAGATATTCAGGAT
GATTCTGATAATGTCACCCGCTTCCTTATGCTGGCTAGGGAGCCCATTATTCCTCGTACTGATAAACCATTCAAGACAAGTGTAGTCTTT
TCACTTGATGAAGGTCCGGGAGTGCTTTTCAAGGCACTAGCCGTTTTTGCCATGCGGAGTATTAACCTTACCAAGATTGAGAGTCGTCCA
CTGCAAAAGCAGGCTTTGCGGGTGCTTGAGGATAGTGTAGATGGATTTCCAAAGTACTTCCCTTACCTTTTCTATGTTGATTTCGAAGCA
TCAATGGCTGATCAAAGAGCTCAAAATGCTCTGGGACATCTAAAGGAATTTGCTACCTTTTTGCGAGTTTTAGGAAGTTACCCTTCAGAT
AGTGGAATAGCTTGACATTACAAGGCAAGCACCTGGAGACGCTCTTATGAAAGATGCACGATGGTGAAATTGGTGGTTCCACTCTCCGAT
GACTGAAATTCCATAATAGATACCATGCAACACTGCGATTTGATACGTGTAATTACTAAGTCCATCTTCTTTTCTTGTGTTCTTTATTTT
CTATCCCAGATTTGTTCTCCTGGGTTCACTGGTCCTGGAGCATATTGGTACTGAAGGAGTGAAATGTAGATGATCAGAGTGATACATGTT
CTGTAGAATCTTTTGCCTTTTAATTGTTTACTTATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	STM	mixed tissues	14805	6
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	675	ACT Preph_dehydrtase	28
2	22478	ACT Preph_dehydrtase	28
5	56667	ACT Preph_dehydrtase	27
1.1	101991	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	25
2	118913	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	25
5	129339	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	24

Preceding Unigenes (1)

Unigene	Build
SGN-U244855	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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