Sol Genomics Network

Notice: the solgenomics has been unstable, we apologize for the inconvenience.

Unigene SGN-U270435

Unigene Basic Information

Unigene ID:	SGN-U270435
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270435
mRNA sequence:	Length: 540 bp

>SGN-U270435 Solanum tuberosum #4 (20 members)
TCACTAAAAGTCAATCATTTCTCAACACCTCAGCTCCTTTTGAAATCAAGAATGGAGATAACATGTGCACTTGTCTGTGAAATCTTACTA
GCAATCTTGCTTCCTCCTCTTGGTGTTTGCCTTCGCAATGGTTGCTGCACTGTGGAGTTCTTGATTTGCTTGGTATTAACCATATTGGGC
TATGTTCCTGGAATTATCTATGCTCTTTATGCAATCCTCTGTGTTGAACGTGAACCACGAGTGGATCATTATGACACTCTTGCTTGATCT
TTGTTGAATATATCATTTCAGATTGTGTGCTTGTTGTTTTGTTTTGCTTGTAAGTTGTACCTGTGTTGCTTCGACTCTACAAAAATGTTG
CAGTCCTCGTGTCGGATCTTCCAAAAAAGCGCTATTTTTGAAGGATCTGACACGCACTCAGTCATTTTTGAAGGGTCTTTTTGACTCCAA
CTATGGATGTATTGTACCTTATGTCACTTGTTCTGAATCAACTCTTGCAGTTTAAGTTTATGGATTGGTAATTTATAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	5
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXLF	Leaves	6585	3
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	6
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1000	UPF0057	19
2	22903	UPF0057	18
5	59797	UPF0057	6
1.1	101638	Protein of unknown function UPF0057 - Molecular Function: molecular function unknown (GO:0005554) - Cellular Component: integral to membrane (GO:0016021)	54
2	119118	Protein of unknown function UPF0057 - Molecular Function: molecular function unknown (GO:0005554) - Cellular Component: integral to membrane (GO:0016021)	20
5	130944	Protein of unknown function UPF0057 - Molecular Function: molecular function unknown (GO:0005554) - Cellular Component: integral to membrane (GO:0016021)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U245814	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: