Sol Genomics Network

Unigene SGN-U270425

Unigene Basic Information

Unigene ID:	SGN-U270425
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270425
mRNA sequence:	Length: 787 bp

>SGN-U270425 Solanum tuberosum #4 (20 members)
CTTTAATCGAAGAGAGAAACTGTGTTTGTGTTAGCGATTGAAAATGGCATCGTCGTTCTCCAGATGGCTCGTGGATCCGAAGAAGAACCC
TCTCGCCGCCATCCACATGAAAACCCTCTCCTCTCGCCTCCGTAATTACGGGCTCCGACATGATGATTTATATGATCCGATGTATGATTT
GGACGTGAAGGAAGCTCTTAATCGCCTTCCGAGGGAGATTGTTGATGCCAGAAACCAGCGCCTTCTGCGTGCCATGGACCTCTCCATGAA
GCACCAGTACCTCCCAGAGGATCTTCAGGCAATGCAAACACCATTTAGGAACTATCTTCAGGAAATGCTGGCTCTTGTTAAAAGGGAGAG
TGCAGAACGTGAGGCTTTGGGAGCATTGCCTCTTTATCAGCGTACACTCCCTTAAAGAAATCCCATCTCCCTTTAAACTTTTTCCATTGA
GAATAACTACTGTACTGGTTGTAGATCTCCGTGGCGGAGATAGAAATAACAGGATGTTTGTTTGCTTCTATGATCCAATACTTCAAGTTA
GTCATCCTGTGGGCTTTATCATTGTAAACCTATATTTTTTCATATGGGACGTACATTTTCGCCAGAACTCCCATATTGCTCTGGTTTGAC
AGGTTTTATTGGTATTTCTGAGTATATATATACATCCTGGAACGTAATTTTTTGCTTTAAAAAAATTCTCATTTTGTTTTAGTGCATGCA
TTGTGGATTTGTCGTAAAAAAAAATCACAACTTTGTCTTTGTGACAGATTAGATTAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
cr14	cytochrome c reductase 14

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	3
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	4
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	4
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1668	UCR_14kDa	11
2	23674	UCR_14kDa	11
5	57746	UCR_14kDa	11
1.1	103345	Cytochrome bd ubiquinol oxidase 14 kDa subunit - Biological Process: electron transport (GO:0006118) - Biological Process: mitochondrial electron transport ubiquinol to cytochrome c (GO:0006122) - Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121)	7
2	121244	Cytochrome bd ubiquinol oxidase 14 kDa subunit - Biological Process: electron transport (GO:0006118) - Biological Process: mitochondrial electron transport ubiquinol to cytochrome c (GO:0006122) - Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121)	7
5	131481	Cytochrome bd ubiquinol oxidase 14 kDa subunit - Biological Process: electron transport (GO:0006118) - Biological Process: mitochondrial electron transport ubiquinol to cytochrome c (GO:0006122) - Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U245258	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: