Sol Genomics Network

Unigene SGN-U270351

Unigene Basic Information

Unigene ID:	SGN-U270351
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270351
mRNA sequence:	Length: 954 bp

>SGN-U270351 Solanum tuberosum #4 (21 members)
AAGAATAACATCCATCCACTTCCTCTCTTCTCAACACACATTAACATGGCTTCTTCCACTCTTTCTCATGTAACTCCTTCTCAGCTATGC
TCAAGCAAAAGTGGTGTTTCATCGGTTTCACAAGCGTTGCTCGTGAAACCGATGAAGATTAATGGTCATGGAATGGGAAAGGATAAGAGG
ATGAAAGTGAAATGTATGGCAGCTAGCATTCCAGCAGATGATAGAGTGCCTGATATGGAAAAAAGGAATCTCATGAATTTGCTTTTATTG
GGTGCACTTGCACTACCAACTGGTGGAATGCTTGTACCTTATGCTACTTTCTTTGCACCTCCTGGATCAGGAGGTGGTAGTAGCGGTACC
ATTGCCAAAGATGCTAATGGCAATGATGTTGTTGTAACTGAATGGCTCAAAACTCATGCACCTGGAACTCGAACCCTCACACAAGGACTA
AAGGGAGATCCTACTTACCTTGTTGTGGAGAACGATGGAACACTCGCGACCTATGGTATCAACGCCGTGTGCACTCACCTTGGTTGTGTC
GTGCCGTGGAATACTGCTGAGAACAAGTTCATTTGCCCTTGCCATGGATCTCAATACAACAATCAAGGAAAAGTTGTTAGAGGACCTGCT
CCTTTGTCCTTGGCATTGGCTCATGCAGACATTGATGATGGGAAGGTGGTGTTTGTTCCATGGGTTGAAACAGACTTCAGAACTGGTGAT
TCTCCATGGTGGGCTTAGAAATCCCATCTAACTTTTATTATTATTAGTATATATATTCTCTTGTATCTTTTGTTACATAGAAGCTTATTC
CCCTTTTTATAAAGAAAAAAAATGTAACTATTGAAACATTACCCTTGCAGTCCCAAAATAACATTTCTCATTTGGGATACAGTTCTTTTC
TGTAATTGTTTATCATCATTTTCATTTTCAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
fes	Rieske Fe-S protein precursor

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	7
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	6
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	119	ABC1	110
2	24501	Rieske_dom Rieske Rieske_proteo	8
5	58536	Rieske_dom Rieske Rieske_proteo	8
1.1	101509	ABC-1 Protein kinase-like	95
2	121797	Rieske iron-sulfur protein - Biological Process: electron transport (GO:0006118) - Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121) - Cellular Component: membrane (GO:0016020) - Cellular Component: ubiquinol-cytochrome-c reductase complex (GO:0045285) Rieske [2Fe-2S] region - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	6
5	132008	Rieske iron-sulfur protein - Biological Process: electron transport (GO:0006118) - Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121) - Cellular Component: membrane (GO:0016020) - Cellular Component: ubiquinol-cytochrome-c reductase complex (GO:0045285) Rieske [2Fe-2S] region - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U245707	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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