Sol Genomics Network

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Unigene SGN-U269655

Unigene Basic Information

Unigene ID:	SGN-U269655
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269655
mRNA sequence:	Length: 1601 bp

>SGN-U269655 Solanum tuberosum #4 (30 members)
GAACAGAGAAAAACACACAAAATATATTTCGGTCCCTTTTTTCTTTGTTTCCCTTTGATTCCTTCTTCTCTTTGGATGGCCGGCCAAACA
GTCATTGTTTCCGGTTTGAATCCGGCGGCCATTCTTCAGTCCACAATCGGCGGAGTTCCGGTGGCAGCAGCGGCGGAGAACGGCCATACC
AGAAAAGTTGTTCCTCTGTCAAAAGATGCCCTTCAGGATTTCATGGTTTCAATCATAACCCAGAAATTACAGGACGATAAACAACCCTTT
TATGTTCTAGATTTGGGTGAAGTTGTTTCCCTTATGGAACAATGGAACTCTGCTTTACCAAATATTCGTCCGTTTTATGCTGTGAAATGT
AACCCTGAACCTTCATTTCTCTCCATGTTGTCTGCTATGGGTTCCAATTTTGATTGTGCTAGCCGTGCTGAAATTGAGTATGTTTTGTCT
CTTGGTATCTCGCCGGACCGGATTGTTTTCGCTAACCCTTGTAAGCCGGAATCCGATATCATTTTCGCCGAGAAAATTGGGGTTAATCTC
ACAACTTACGATTCCGAGGATGAAGTTTACAAGATCCGTAAACATCACCCGAAATGCGAGCTTTTGCTTCGAATCAAACCCATGAACGAC
GGCAACGCCAGATGCCCAATGGGTCCAAAATACGGCGCATTACCGGAAGAAATCGAGCCGCTCCTCCGTACAGCTCAAGCCGCTAGACTC
ACCGTGTCCGGCGTTTCCTTCCATATCGGCAGCGGAGACGCCGATTCCAACGCTTATCTAGGAGCCATAGCCGCAGCGAAACAAGTTTTC
GAAACAGCAACTCAACTCGGAATGCCAAAAATGACGGTACTCGACATCGGCGGCGGATTTACCTCCGGCCACCAATTCACCTCCGCTGCT
CCCGCCGTGAAATCAGCTCTGGAAACCCACTTCCAGAACTCCCCGGAGCTAACAATCATAGCTGAACCGGGTCGTTTCTTCGCAGAAACG
GCGTTCACTTTAGCAACAACCATCATCGGCAAAAGAGTCAGAGGTGAATTAAAAGAATACTGGATCAACGATGGGTTATACGGATCGATG
AACTGTGTACTTTACGACCATGCTACGGTGACGGCGACGCCATTAGCGTGCATGTCGAATCGTAACAACCTCAACTGCGGCGGGTCGAAA
ACGTTTCCGTCGACTGTATTCGGGCCCACCTGTGATGCACTTGATACCGTGTTGAGGGATTACCAGTTACCGGAGCTGCAGGTTAATGAC
TGGCTGGTTTTTCCTAATATGGGTGCTTATACAAAAGCTGCTGGATCAAATTTCAATGGATTTAATACATCCGCCATTGTTACTCACCTT
GCTTATGCTTATCCAAGCTAATGATTAATTAGGCTTAAATTAGCATGGTGGTTGTAATTTTATTTTTTTCTTCTAATTTTGTCGTTGTTT
GGTAATTTATTTGCCAATCAGCTGGTAGTTTCTTTTTTGTCTCATAAGAAAAGCAAGGATTTGCCAATTGGATTTGCTTGTAGTTATATT
TTATGTCTAAATAATCCAATTTCATCTATTGAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	6
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	5
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	7

mRNA member sequences (30)

Alignment image suppressed for unigene with 30 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	514	Decarbxylse2 DAP_decrbxlase	34
2	23737		11
5	57809		11
1.1	101407	Orn/DAP/Arg decarboxylase 2 - Molecular Function: catalytic activity (GO:0003824)	255
2	120256		10
5	130536		10

Preceding Unigenes (2)

Unigene	Build
SGN-U244378	Solanum tuberosum #3
SGN-U248759	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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