Sol Genomics Network

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Unigene SGN-U268532

Unigene Basic Information

Unigene ID:	SGN-U268532
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268532
mRNA sequence:	Length: 1999 bp

>SGN-U268532 Solanum tuberosum #4 (74 members)
AGAGAGAGAGAGTGACATTGAGAATAGATTGTGCTGAGAGATAAGGAGATTTCTTGTAGAGAGGAAAAAATTTAAAGTAAAGAAAAAAAA
ATGGCCTCAGCATCTCTACTAAAGTCATCCCCAGTTCTTGACAAATCTGAGTTTTTAAAGGGGCAAAGCCTTCGTCAGCCTTCCGTCTCA
GTGGTCCGTTGCCATCCCACCAATGCCACTTCTCTTACTGTCCGCGCTGCTTCCTCTTATGCTGATGAGCTCATTAAAACCGCTAAAACT
GTTGCATCACCAGGACGTGGAATTTTGGCCATGGATGAGTCGAACGCCACTTGTGGAAAGCGTTTGGCTTCCATTGGTTTGGAAAACACT
GAGGCTAACCGCCAAGCTTACCGTACCTTGCTGGTGTCAGCTCCAGGCCTTGGACAGTACATCTCTGGTGCTATTCTTTTTGAGGAGACC
CTCTACCAGTCTACCGTTGATGGACGCAAAATAGTTGATGTTCTTATTGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTTTG
GTTCCCCTTGCTGGTTCAAATGATGAGTCATGGTGTCAAGGTCTTGACGGACTTGCCTCCCGCTCTGCTGCATACTACCAACAGGGAGCA
CGTTTCGCCAAATGGCGTACCGTGGTGAGCATTCCCAACGGACCGTCTGCATTGGCTGTGAAGGAAGCAGCATGGGGATTGGCTCGCTAT
GCTGCCATTTCTCAGGACAATGGTTTGGTCCCAATTGTGGAGCCAGAGATCTTGTTGGACGGTGAACACGGCATTGACAGGACTTTTGAG
GTAGCACAGAAGGTCTGGGCTGAAGTCTTCTTCTACTTGGCTGAGAACAATGTCATGTTTGAGGGTATCCTCTTGAAACCAAGCATGGTT
ACTCCTGGTGCTGAATGCAAAGACAGGGCCACTCCTCAGCAGGTCGCAGACTATACTCTCAATCTCCTCAAGAGGAGGATTCCCCCAGCT
GTCCCTGGAATCATGTTCTTGTCTGGTGGGCAATCAGAAGTTGAGGCAACATTGAACTTGAATGCCATGAACCAAGCTCCAAACCCGTGG
CACGTGTCGTTCTCTTACGCAAGGGCTCTTCAGAACACTTGCTTGAAGACATGGGGAGGACAACCTGAGAATGTGAAGGCTGCTCAGGAT
ACTTTACTTGTCAGGGCCAAAGCAAACTCTCTTGCTCAGCTCGGAAAGTACACCGGTGAGGGTGAATCTGATGAAGCTAAACAAGGAATG
TTTGTAAAGGGCTATGTCTACTAAGTTATAGGCACTGCAGTCTTGAAGAAGAGGGGCAAAACAAACAAAGATTATGAGCTGAATGGTTCA
CAGTGAAGCAGAGAAATGATGAATTATCTCATACAATGAGTTATGCAATTAGTAAAGCCATAGAGAAGAGTATTTTTGTTTATTTGATTA
CCTGTACTTTTTTTAACAACTTAAAATAAACTTTCTTGCTGATTGAGACTAGTTAGTGTTGCTTTATGAAGTTATAAACCAGCTCTCTGT
TCTATTATGCAGACTGAATAATGAAAATTACTTAGTGTGAAAAAAAAAAAAAAAGTGCTGTTAGTGATGAACAGAGGATGAATGTAGTTC
GTAATTCATGTCCTGGTGCGGGGGCTTGTGGTGGAATGTATACAGCAAACACCATGGCATCTGCTATTGAGGCAATGGGCATGTCACTGC
CTTATAGCTCTTCCACACCAGCTGAAGACTCACTAAAGTTGGATGAGTGTCGCCTAGCGGGAAAATATCTTCTGGAATTGTTAAAGATGG
ACTTGAAACCTCGAGATATCATCACAAAAAAGTCCCTTCGAAATGCAATGGTAGTTGTCATGGCACTTGGTGGATCTACCAATGCCGTAC
TACATTTAATTGCTATTGCAAGGTCTGTTGGTTTGGAATTAACTCTAGATGACTTCCAAAAGGTTAGCGATGAGGTTCCTTTCCTTGCAG
ATCTGAAGCCTAGTGGAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Y10380	plastidic aldolase	plastidic aldolase

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	7
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	33
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	6
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	22
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (74)

Alignment image suppressed for unigene with 74 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	205	Aldolase_I	72
2	22112	Aldolase_I	63
5	56353	Aldolase_I	62
1.1	101493	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	103
2	118519	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	69
5	129013	Fructose-bisphosphate aldolase class-I - Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332) - Biological Process: glycolysis (GO:0006096)	67

Preceding Unigenes (1)

Unigene	Build
SGN-U243381	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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