Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U580808 and SGN-U591067 in the current build, Tomato 200607 #2

Unigene SGN-U214258

Unigene Basic Information

Unigene ID:	SGN-U214258
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214258
mRNA sequence:	Length: 1313 bp

>SGN-U214258 Lycopersicon Combined #3 (39 members)
GTTGTTGATTTATAAATACTTATTATAAAGTCAATAATGGGGGGCTTTTCATTTTAATGGCGGATATTACTAGAACAAACAATCTGATTC
ATTTTCTAGCCCCTATAGCTTCATCTTCTTAAATATCTTTTGCTCTACTATATATCTTAAGATAAGAATAGGAATAAAGTTTCTACTTTT
TATTGCATCTTCTTCTTTCTTGATATTATTGAACTGAAAATGGCTGTGGCTATGGTTTCTTGTGGAATCCCCACTAGTTTAAAACTTATA
GAGAAGCAACCCGTTTCAATTCCAGGCTTCTTTAATGGGTCTTTAGCTTTGAATCCAGTCCAAAAACTGCACGTTACACCCAAGAGATTA
GCTTTATCTGGGAGTACAATTGTTCTGAAAGCATCGGCTACAGCTGTGGAGGATGGAAGTTCACAAGAGACTGCTGCAGTTCCAACACCC
AAAGTTGTAATTGATTTGGATTCAGATCCAGAAGCAACGATTGTAGAGGTTACCTTTGGGGATCGCCTTGGGGCACTTCTCGACACGATG
AATGCATTAAAAAACCTTGGGCTGAATGTTGTCAAGGCTAATGTCTGTCTTGATTCATCTGGGAAGCATAACACATTCGCCATCACAAAA
GCTTCTACGGGTAGGAAGGTCGATGATCCAGAGCTGCTTGAAGCAATTCGTTTGACGATCATCAATAATATGATGGAATACCACCCGGAA
TCTAGCTCCAGATTAGCTATGGGAGAAGCTTTCGGTGTTTTTCAACCATATCAGAAGATTGACGTGGACATAGCGACCCATATCCATGTT
TATGACGATGCTCCTGAAAGAAGTTTACTCTGTGTAGAGACAGCAGACAGACCTGGACTGATAGTTGATCTTGTCAAGACCATTACTGAC
ATAAATGTTGATGTTGAATCAGGAGAGTTCGATACTGAGGGTTTGCTTGCTAAGGCGAAATTTCATGTCAACTACAAGGGCAAAGCGTTG
ATCAAGCCCCTTCAACAGGTTCTTGCGAATAGCCTGCGTTATTTCTTGAGGAGACCAACAACAGAGGATGCAAGTTTTTAATACAATGCT
GAAAAGTGAGAAATTGTCAACAGGGTTAACCAAGTACTTTCAATTTTCAAGATAATGAAGCTTGCTGGTTTTAGCAGCACCGATCCATTC
CAAGGTGTAAACAGCGAAAATATGCTTGAAACTCAGAATCATAGCTTCAATACTGCTGTAACAATGTAGATTGGTACCATTTATACATTA
ATGATATAAGTTTTCAGAACAGGAAAACAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	9
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	5
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3

mRNA member sequences (39)

Alignment image suppressed for unigene with 39 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	175	ACT	80
2	22826	ACT	19
5	57019	ACT	18

Preceding Unigenes (1)

Unigene	Build
SGN-U144661	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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