Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U578513, SGN-U580606, SGN-U590380, SGN-U590434, and SGN-U593158 in the current build, Tomato 200607 #2

Unigene SGN-U213434

Unigene Basic Information

Unigene ID:	SGN-U213434
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213434
mRNA sequence:	Length: 1143 bp

>SGN-U213434 Lycopersicon Combined #3 (73 members)
TTCACATTCTCTTCAGGGTTTCTCTAGTAGTCTCTCTGAAAAAAAATGGCCGACGTTGAATACAGGTGCTTCGTCGGTGGTCTGGCATGG
GCCACCACCGACCAAACACTTTCGGAAGCTTTTTCTCAGTACGGCGAAGTGGTCGAATCCAAGATCATCAATGACCGGGAAACTGGTAGA
TCTAGAGGATTTGGATTCGTTACCTTCAAGGATGAGCAAGCCATGAGGGATGCTATTGAAGGGATGAACGGCCAGGATCTTGATGGTCGC
AACATCACCGTGAACGAAGCTCAATCACGCGGAGGCGGTGGAGGTGGAGGTGGAAGAGGCGGGGGTGGTTACGGAGGTGGCCGACGTGAA
GGCGGTGGCGGAGGCTACGGTGGTGGCGGCGGCTACGGAGGTGGCCGACGTGAAGGCGGCGGCGGCGGCTACGGTGGAGGCGGCTACGGA
GGTGGTCGTCGTGAAGGTGGTTACGGTGGAGGCGGTGGTGGTTATGGAGGAGGTGACCGCTACAACGATCGCTCTTCAAGAGGTGGAGGC
GGTGGTGGTTCCGATGGGAACTGGAGGAATTAGATTTTCTGTTGGCTTTTTAGATTGGTCTCGTCTGAACTTACTTATGGTTTCGAAGTT
TGATTGAAGTTACGTTTATGGTTTTGCCGTGGTTACTGTTAGTGTTCTCGTTTTTGACCGCTATTGTTACCGTGATGTTACCCTGTGGAT
CCTTGTTTACAAAGTTCTCATGAATGGAAGTGAATGGAGATTTATTAATTATAAAAAAAAAAAAAAATCTCCTGTTTGTTTCATCATCTT
TGTTAAGCCATTGTCTAGTTGTCTAGCTGTTTTTGTTGGTTTACATCAAGTGTCCATCCACATTATTAGCTGTGGCCTATTAGTGGTATT
GACTAGTAGTGGTCTCGAGTCAACATTCCGCTATCATATCAAGTTATCTTCATGGTTCCTCTAAATATCTTCTTGGTTTAGATTCATGAT
CGAACACGTTTGTTAGACAATCAGATACTGCAGTAGTTTACTTTTAGTATTAATGCCTAGATTTGGTAGATTTTCGTCAAAACTTTTGAG
CGTATGAGTGTCTAGCATCAGTCTCAAGTCTTTGGTGCATTTTAACTAGTGATTATATCTTGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	8
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	6
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	8
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	9
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	8
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	9
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (73)

Alignment image suppressed for unigene with 73 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	3	RNA_rec_mot	1201
2	21977	RNA_rec_mot	370
5	56301	RNA_rec_mot	101

Preceding Unigenes (1)

Unigene	Build
SGN-U143916	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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