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Unigene SGN-U210102

Unigene Basic Information

Unigene ID:	SGN-U210102
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	210102
mRNA sequence:	Length: 333 bp

>SGN-U210102 Petunia hybrida #1 (1 members)
TGAAACTGTGAAGAGTTTACAGGAGAAAGGTCATCTTCCAATTCCTACTCAAAAAGATGAGCCTATTATTCGAATTCAGCCTTAGATTCC
AAGGCTCTTAGCATATATATCGAGGAACGGACGCCAATTGTGAGGAATCGTATAGTCGACCACAACTTATTTGACATTAAGGTGTACTTG
TCGTTGTTGTTGGATCAACCGGTAAAGTTGACCATGTGCTTTGTTTTACTACAAGTTTTCATGGGAATGTTTTTAGTGTTTCCATTGTTG
TTATCAAATATTCTATTGTAAATTATCCTAAAACATGAAAATCTATTATTACGAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-C2H4	all floral organs anthesis	3072	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E526520
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P205445 (76 Aa)

AYYSNSALDSKALSIYIEERTPIVRNRIVDHNLFDIKVYLSLLLDQPVKLTMCFVLLQVFMGMFLVFPLLLSNILL

SignalP predicts non-secretion with a score of 0.031

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P42776 (27 Aa)

ETVKSLQEKGHLPIPTQKDEPIIRIQP

SignalP predicts non-secretion with a score of 0.02

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	65	3Beta_HSD	184
2	22015	3Beta_HSD	144
5	64879		2
1.1	101435	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	166
2	118460	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	116
5	138161		2

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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