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Unigene SGN-U209205

Unigene Basic Information

Unigene ID:	SGN-U209205
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	209205
mRNA sequence:	Length: 406 bp

>SGN-U209205 Petunia hybrida #1 (1 members)
AAGCGATGCAGCATACCAACAGGGTGTGGCAAGCTGGTTACTGATAACTGGTATTGAAAAAGGTGGTCATGCTATATGAATGCCCTTGCA
AGTTACTGCTCCTGATATCAAGTCTATGCAGATCCATCATGATTAAACATCCCAAGATCCCTTTGATGAAACTAAAATCACCAATCGTCA
TGCTACTCTTGTGCTGAACCCAGTGGTGAAGCCTAAGCCCGGTATCGTGAGTCTTAAAAGTGAATCTATATCATATAGGGGCCATGAAAT
AATATCGAAACCCATTAGTTTTTCGTGCTGTAATCGTTATATCCATGTGTTTCTCTTGCTTGTTATATGGAAAATATTATTACCGTTGAG
TTTCTTTGTTCTATGGTTGTTATTATTGTTGTTCTGGAAATATTAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-YF	whole fruit (ovary) several	947	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E536695
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P204529 (90 Aa)

TSQDPFDETKITNRHATLVLNPVVKPKPGIVSLKSESISYRGHEIISKPISFSCCNRYIHVFLLLVIWKILLPLSFFVLWLLLLLFWKYY

SignalP predicts non-secretion with a score of 0.044

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P45229 (78 Aa)

SDAAYQQGVASWLLITGIEKGGHAYECPXQVTAPDIKSMQIHHDXNIPDPFDETKITNRHATLVLNPVVKPKPXYRES

SignalP predicts non-secretion with a score of 0.288

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2012	Znf_C2H2	9
2	24150	Znf_C2H2	9
5	58199	Znf_C2H2	9
1.1	101501	Homeodomain-like	98
2	120722		8
5	130987		8

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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