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Unigene SGN-U209122

Unigene Basic Information

Unigene ID:	SGN-U209122
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	209122
mRNA sequence:	Length: 365 bp

>SGN-U209122 Petunia hybrida #1 (1 members)
CTAGCGCGTGAGCCAATTATCCCCCGTACTGATCGTCCTTTTAAGACGAGCATAGTCTTCGCGCACGATAAAGGGACGAGCGTGTTGTTC
AAAGTGTTGTCCGCGTTTGCGTTTCGTAATATCAGTTTAACAAAGATTGAATCGAGGCCGCATCGTAACCGTCCGATTAGGTTGGTAGAT
GATGCAAACGTAGGGACAGCAAAGCATTTTGAGTATATGTTTTATGTGGATTTTGAAGCGTCAATGGCGGACGTAAGAGCACAAAATGCA
TTGGCTGAAGTTCAGGAGTTCACGTCTTTTTTAAGGGTGTTGGGTAGTTATCCTATGGATATGACTCCTTGGTCTCCTTCCAGGGATGCT
TAATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ADT3	Arogenate Dehydratase 3	arogenate dehydratase/prephenate dehydratase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-DevA	all floral organs several	2870	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E523474
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|18390869\|ref\|NP_563809.1\|	223	7.5e-58	93.16	351 bp (96.2%)	1
Description:	ADT6 (arogenate dehydratase 6); arogenate dehydratase/ prephenate dehydratase [Arabidopsis thal…
arabidopsis	blastx	At1g08250.1	223	1.8e-59	93.16	351 bp (96.2%)	1
Description:	At1g08250.1 68408.m00819 prephenate dehydratase family contains similarity to prephenate dehydr…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P204442 (120 Aa)

LAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEASMADVRAQNA
LAEVQEFTSFLRVLGSYPMDMTPWSPSRDA

SignalP predicts non-secretion with a score of 0.079

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P45150 (122 Aa)

LAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEASMADVRAQNA
LAEVQEFTSFLRVLGSYPMDMTLGLLPGMLNX

SignalP predicts non-secretion with a score of 0.079

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	675	ACT Preph_dehydrtase	28
2	22478	ACT Preph_dehydrtase	28
5	56667	ACT Preph_dehydrtase	27
1.1	101991	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	25
2	118913	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	25
5	129339	Prephenate dehydratase - Molecular Function: prephenate dehydratase activity (GO:0004664) - Biological Process: L-phenylalanine biosynthesis (GO:0009094)	24

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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