Sol Genomics Network

Unigene SGN-U207469

Unigene Basic Information

Unigene ID:	SGN-U207469
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	207469
mRNA sequence:	Length: 1380 bp

>SGN-U207469 Petunia hybrida #1 (21 members)
CCTCGTGCCGAATTCGGCACGCTTTATTTTTCCCATTTTATAGCTTTTTCAATATCGTATAGGCCACATATAATGGCTATTCCAAAAGGA
TTAGAAATCAATAATGTAGGATTGGTTTTACTTTTGGGTATAGCCATGTTATCAAAAGTCGCTCAATGTGCACCTTTTGTATACCGTCGT
GGCCTTGTCGAGAATGTGACAGTTTTTGATGTTACGAAGTTTGGAGCTAAACCTAATATCCCTGCAAGTAGTTATGGGGGTGAAGGTAAC
ATTGAAGATACTGATTCAGCTCAGGCATTTATGAAGGCATGGAGAGCAGCTTGCACAGCACCAGGGCCAGCAAAAGTTCTTATTCCACCA
GGAACATTCATTACAGCACTAACTGGTTTTCAAGGGCCATGCACCAGTCCTAGGCCTATAACTATTGAAATTCAAGGAACTTGGTTGGCA
TATACAGACATATCTTTATACACAGATGGACAATGGATTAGCGTTGAAAACGTAGATGGTGTTGTTATTACTGGTGGAGGAACTCTCAAC
GCTCAAGGAAATGCTAGTTGGCAGTATGTTAGCAAATCTGGAGGTGGTGTTCCTCTCCCCATTTCACTTACATTTCAGAGTGTACGCAGT
TCTTCCATCCAGAACATTAATTTTGTAGATGCCAAAGGTGTCCACTTGAAAATCACTGATAGCAGTGACTTCTCAGTTTCAAACATCCGA
ATTACTGCCCCAGGAGATAGTCCAAACACTGATGGTCTTCATATAAGTCAATCATTAAATGTCAATGTCACAGATAGCATCATTGGAACA
GGAGACGATTGCATTAGTATTGGGGATGGCAACTCCAATATTTATGTCTCTCGTATAGCTTGTGGCCCAGGACATGGAATAAGCATCGGT
AGTATTGGGAAACGCCCAACCGAAAAGGACGTTAATGGAGTTACAGTAAAAAATTGTACATTACGGGGTACAACAAATGGTGCAAGAATA
AAAACTTATCGAGCTTCACCTTCTCTAAAAGTTTCTGATGTCGTATATGAAGATATCATCTTGGATAATGTTCGAAATCCCATCGTTATC
GATCAAAACTATAATTCCAAGAACAAAAATGAGCCGTCTAGAGTGAAACTCGTGGATATTCACTTCAGGAACATAAGGGGTACAACACCT
TCAATACTTCCAGTGGCACTCAACTGTAGTGAAACACTTCCCTGTGAAGGAATTGAATTGTCTAACATTAATCTAGCTCCAGTTGGTTCA
ATTGGACCTCTATCGTCTGCAGTATGTCAAAATGCCAAAACCATATTGAATGGGAATATTAACCCGCCAGCATGCTAATTTCATCTTTCC
TACATCAAATTATGTCTATGAAATTATGTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
PGPS-NH19	Petunia germination pollen specific NH19	Petunia germination pollen specific

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	cPHA	stamens stamens from open flowers on 18-20 week old plants	6801	21

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	76	Glyco_hydro_28	160
2	22051	Glyco_hydro_28	95
5	56305	Glyco_hydro_28	94
1.1	101443	Virulence factor pectin lyase fold Glycoside hydrolase family 28 - Molecular Function: polygalacturonase activity (GO:0004650) - Biological Process: carbohydrate metabolism (GO:0005975)	154
2	118479	Glycoside hydrolase family 28 - Molecular Function: polygalacturonase activity (GO:0004650) - Biological Process: carbohydrate metabolism (GO:0005975) Virulence factor pectin lyase fold	94
5	128973	Glycoside hydrolase family 28 - Molecular Function: polygalacturonase activity (GO:0004650) - Biological Process: carbohydrate metabolism (GO:0005975) Virulence factor pectin lyase fold	93

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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