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Unigene SGN-U206270

Unigene Basic Information

Unigene ID:	SGN-U206270
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206270
mRNA sequence:	Length: 242 bp

>SGN-U206270 Solanum melongena #2 (1 members)
TTTTTTTTTTTTTTTTTTTTTTTTTTGGCATGAAGAACAGGAATTTTATTCATTAATAAAATCAATAATACAGGACAGCCTAAAATTTAC
AGGGGCATAGGGACTAACTCACAAGGTAAACTGATCCGAGAAATGCCTAATTTTGGCAAAGAGACCTAACCAGATATCATATGTCAAACG
CGTGATGTATGCTTCATCATTGAATCTTCCATAGGGGCTGCTTGGTTAGATGAACATGCAGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E519065
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P208684 (41 Aa)

RTGILFINKINNTGQPKIYRGIGTNSQGKLIREMPNFGKET

SignalP predicts non-secretion with a score of 0.036

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30989 (27 Aa)

LHVHLTKQPLGRFNDEAYITRLTYDIW

SignalP predicts non-secretion with a score of 0.061

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2	Prot_kinase	1610
2	39166		1
5	77030		1

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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