Sol Genomics Network

Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Unigene SGN-U203200

Unigene Basic Information

Unigene ID:	SGN-U203200
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	203200
mRNA sequence:	Length: 456 bp

>SGN-U203200 Capsicum annuum #1 (1 members)
ATTGGTCGCTGGGAATATTATCTCTCTTGATTTGAGTATTGCTCAAGTCTTTGAGCTAGTATGGAAGAAATCCAATAGTCAGTCTGCAAG
TGTAGTTGCCTCAACTACTTCACTTTCTTCCAATGCTGCTGTATCAGTCAGAGATTGCCCTCCGATGACAGTGACCTACCGACTTCAGGG
CTTAGATGGTGAAGCTACTGAGCCCATGATTAAAGAAATTGATGAGGATAGAGAGGAGACCCAAGATCCAGAAGTGGAATTTGCGATAGC
TGGCGCAGCGCGGGATTGTGGTGGACTGGAAATCCTTTTAGGGATGGTTCAGCGTCTGCAAGATGATTTCAAGTCCAACCGACAGCAGTT
GGTTGCAGTGCTTAATTTGCTCATGCTTTGCCGCAAGATAAAAGAAAACAGAAAAGCATTACTGAAGTCGGGAGCGTTAGGCTTACTTCT
TGACAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS12	Placenta	4279	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E513183
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2965	Znf_GATA ReticulocyteBP Znf_C2H2 HEAT DUF118 Rim_ABC_transpt RNA_rec_mot CytC_heme_BS MurB Znf_Nrecognin Znf_ZZ DUF371 Polycystin_cat PolC_DP2 EGF_like	6
2	25710	Znf_GATA ReticulocyteBP Znf_C2H2 HEAT DUF118 Rim_ABC_transpt RNA_rec_mot CytC_heme_BS MurB Znf_Nrecognin Znf_ZZ DUF371 Polycystin_cat PolC_DP2 EGF_like	6
5	61319	Znf_GATA ReticulocyteBP Znf_C2H2 HEAT DUF118 Rim_ABC_transpt RNA_rec_mot CytC_heme_BS MurB Znf_Nrecognin Znf_ZZ DUF371 Polycystin_cat PolC_DP2 EGF_like	4
1.1	101373	Armadillo-like helical - Molecular Function: binding (GO:0005488)	564
2	121684	Armadillo-like helical - Molecular Function: binding (GO:0005488) Zinc finger N-recognin - Molecular Function: ubiquitin-protein ligase activity (GO:0004842) - Biological Process: ubiquitin cycle (GO:0006512) - Molecular Function: zinc ion binding (GO:0008270) Zinc finger ZZ-type - Molecular Function: zinc ion binding (GO:0008270) Quinoprotein amine dehydrogenase beta chain-like WD40-like Flavocytochrome C3 N-terminal cytochrome	6
5	131906	Armadillo-like helical - Molecular Function: binding (GO:0005488) Zinc finger N-recognin - Molecular Function: ubiquitin-protein ligase activity (GO:0004842) - Biological Process: ubiquitin cycle (GO:0006512) - Molecular Function: zinc ion binding (GO:0008270) Zinc finger ZZ-type - Molecular Function: zinc ion binding (GO:0008270) Quinoprotein amine dehydrogenase beta chain-like WD40-like Flavocytochrome C3 N-terminal cytochrome	6

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: