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Unigene SGN-U201784

Unigene Basic Information

Unigene ID:	SGN-U201784
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	201784
mRNA sequence:	Length: 455 bp

>SGN-U201784 Capsicum annuum #1 (1 members)
ACGATGCAGTGATAAGAATGAACGACGAATACTTAAGATCGGCCATAGATTACCTCGAATTAAACAAAGATTCATATAAATCAATCCAAT
GGCCTATTTTTGATCCAAATCCTAATGTTAAAATTAACACTTGGAGTAAGTTGCCAGTCTATGATTGTGATTTTGGATGGGGAAAGCCAA
TTCATATGGGACCTGCTTCTCTTTTGAATGAAGGATTGGTGTATATTTTGCCAAGTTCAAATAATGACAAGAGTTTGACATTGGCTATGT
GTTTAAATTCTCATCATATGCCACTTCTTGAGAAGTATTTGTATGACTTCTGAAAAGTTTGGTCTCTGTATTGTTCCAATTTTCTCGAAT
GTCCTCGATCTGACAGGGCATGATTATATTTAAGTGTGTTTGAGTGTTGGTTTTTATAAGGTTGGTGTTTGGGGATNAGNTGGGTGTGTG
GGTGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS07	Flower bud	4235	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E496795
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|6469032\|dbj\|BAA87043.1\|	137.1	7.4e-32	57.14	315 bp (69.2%)	3
Description:	N-hydroxycinnamoyl/benzoyltransferase [Ipomoea batatas]
arabidopsis	blastx	At5g48930.1	113.6	4e-26	48.57	315 bp (69.2%)	3
Description:	At5g48930.1 68412.m05459 anthranilate N-hydroxycinnamoyl/benzoyltransferase family similar to a…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P155848 (106 Aa)

DAVIRMNDEYLRSAIDYLELNKDSYKSIQWPIFDPNPNVKINTWSKLPVYDCDFGWGKPIHMGPASLLNEGLVYILPSSNNDKSLTLAMC
LNSHHMPLLEKYLYDF

SignalP predicts non-secretion with a score of 0.026

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P36277 (129 Aa)

DAVIRMNDEYLRSAIDYLELNKDSYKSIQWPIFDPNPNVKINTWSKLPVYDCDFGWGKPIHMGPASLLNEGLVYILPSSNNDKSLTLAMC
LNSHHMPLLEKYLYASEKFGLCIVPIFSNVLDLTGHDYI

SignalP predicts non-secretion with a score of 0.026

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	49	Transferase	234
2	22054	Transferase	93
5	57077	Transferase	17
1.1	101413	Transferase	242
2	118498	Transferase	79
5	129230	Transferase	29

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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